LOC120568021



Basic Information


Item Value
gene id LOC120568021
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1372855 ~ 1373625 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XR_005640649.1
TCTCTCAACTTCTCTGTCCAAGGTACCTCCCACATCCCTCACCTTCTCTGTCCAAGGTACCTCCCACATCCCTCACCTTCTCTGTCCAAGGTACCTCCCACATCCCTCACCTTCTCTGTCCAAGGTACCTCCCACATCTCTCACCTTCTCTGTCCAAGGTACCTCCCACATCTCTCACCTTCTCTGTCCAAGGTACCTCCCACATCTCTCACCTTCTCTGTCCAAGGTACCTCCCACATCTCTCACCTTCTCTGTCCAAGGTACCTCCCACATCTCTCACCTTCTCTGTCCAAGGTACCTCCCACATCTCTCACCTTCTCTGTCCAAGGTACCTCCCACATCCCTCACCTTCTCTGTCCAACATCTCTCACCTTCTCTGTCCAAGGTACCTCCCACATCTCTCACCTTCTATTCTTGTATTTCACCTTTACTTTTCACAGCTCCCAGTATGGCGTTGTTAGCTCCGGGGAGGCTTGTTTGTTGTGAAGATAAACTCGTTAagtgcgtacgtgtgtgtgtgtgtgtgtgtgtgtg
>XR_005640650.1
TCTCTCAACTTCTCTGTCCAAGGTACCTCCCACATCCCTCACCTTCTCTGTCCAAGGTACCTCCCACATCCCTCACCTTCTCTGTCCAAGGTACCTCCCACATCCCTCACCTTCTCTGTCCAAGGTACCTCCCACATCTCTCACCTTCTCTGTCCAAGGTACCTCCCACATCTCTCACCTTCTCTGTCCAAGGTACCTCCCACATCTCTCACCTTCTCTGTCCAAGGTACCTCCCACATCTCTCACCTTCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005640649.1 True 534 lncRNA 0.51 3 1372855 1373625
XR_005640650.1 False 251 lncRNA 0.53 3 1372979 1373625

Neighbor


gene id symbol gene type direction distance location
sft2d3 sft2d3 coding downstream 167314 1203988 ~ 1205541 (-)
LOC120568681 LOC102798692,LOC102306166,LOC101470701,LOC102196346 coding downstream 236304 1120371 ~ 1136551 (-)
LOC120567934 NA coding downstream 319195 1050897 ~ 1053660 (-)
LOC120567797 NA coding downstream 471659 895507 ~ 901196 (-)
ccr9a NA coding downstream 524210 843808 ~ 848645 (-)
LOC120568025 LOC103365692,LOC101173737 coding upstream 41531 1415156 ~ 1428314 (-)
LOC120567872 NA coding upstream 59610 1433235 ~ 1435275 (-)
LOC120568497 NA coding upstream 382996 1756621 ~ 1764145 (-)
lamc1 lamc1,LOC103398751 coding upstream 1145226 2518851 ~ 2601477 (-)
smg7 smg7 coding upstream 1252213 2625838 ~ 2662765 (-)
G111222 NA non-coding downstream 24553 1346507 ~ 1348302 (-)
G111208 NA non-coding downstream 50201 1265661 ~ 1322654 (-)
G111213 NA non-coding downstream 78717 1289992 ~ 1294138 (-)
G111201 NA non-coding downstream 141440 1231017 ~ 1231415 (-)
G111194 NA non-coding downstream 173432 1198963 ~ 1199423 (-)
G111235 NA non-coding upstream 97474 1471099 ~ 1508883 (-)
LOC120567884 NA non-coding upstream 124137 1497762 ~ 1497967 (-)
LOC120567885 NA non-coding upstream 151049 1524674 ~ 1526105 (-)
G111245 NA non-coding upstream 176156 1549781 ~ 1664043 (-)
G111254 NA non-coding upstream 273548 1647173 ~ 1660408 (-)
mfn1a LOC102798404,LOC103374728,LOC101171942 other downstream 58010 1296833 ~ 1314845 (-)
LOC120568485 NA other downstream 258673 1100064 ~ 1114182 (-)
G111133 NA other downstream 272185 1008233 ~ 1100670 (-)
G111134 NA other downstream 362755 1008894 ~ 1010100 (-)
G111136 NA other downstream 366930 1005071 ~ 1005925 (-)
LOC120568022 NA other upstream 18183 1391808 ~ 1409528 (-)
G111226 NA other upstream 39331 1412956 ~ 1417959 (-)
LOC120567890 NA other upstream 369675 1743300 ~ 1743839 (-)
LOC120567903 NA other upstream 967837 2341462 ~ 2405093 (-)
G111573 NA other upstream 1199679 2573304 ~ 2578014 (-)

Expression



Co-expression Network