LOC120568296


Basic Information

Item Value
gene id LOC120568296
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18232617 ~ 18233706 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640695.1
tttttttttacatttacaggcCATCCACAAACATAAAAGAGGCGCTGTCATTGGTTCAGACATTCCCTGAATGATGGATCAGAAATTGGCTatTTCCAGAGACTCCAGAATGAAAACCAAGCTCTGAGGGAGGAGAACCACACCCTGAGGGAAAGCAATGCACGAGCAGCTTCGGATGACAGCGGCTCACTTCAAGAGCAGGTGAAGCAAGTTGGGACAATGTTGAAGACGTTTGCTTGCACTTGGCAATCAGGTGCAGATCAGACCCTAATGCTGCGACGTCTTGGAGAGTTTGGCGATGTTGTGTGTAGCATGGACAACAAAATGGAAACTATGCAGCAACATTTCAGTGCCAATGTGTCTGTTGGAGAGCCACTGATGAGGCGGTCCAGGTTAACGTTACGCGTTACCTGAAAGCATCTGACCGTGAAGGCGGAAAAAGGCGCCGCACAGCTGAGAGGGACCCACAGCCGACCCCTTAAACCTAGGCTGACTACTGACACCCCCGCATCACTGACAACTGGAACACTTTCTTTATCCTGCAGTCAGTAACATCAAGAAGCCAGAAGTGCCAGACTACACTCACCCAATCCACACTATTCTCTGTGgaaatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640695.1 True 614 lncRNA 0.49 4 18232617 18233706

Neighbor

gene id symbol gene type direction distance location
LOC120568290 dnah8 coding upstream 1617 18175983 ~ 18231000 (+)
LOC120568288 klf2,LOC104966780 coding upstream 82773 18147898 ~ 18149844 (+)
ap1m1 ap1m1,LOC107696211 coding upstream 142574 18075107 ~ 18090043 (+)
cib3 cib3,LOC107687907 coding upstream 180188 18048066 ~ 18052429 (+)
LOC120567609 LOC103353062,LOC104950308 coding upstream 187389 18043397 ~ 18045228 (+)
LOC120568291 NA coding downstream 24424 18258130 ~ 18264859 (+)
LOC120568293 LOC103353052,LOC101477959 coding downstream 32211 18265917 ~ 18277003 (+)
LOC120568295 nmrk2,LOC106914787,LOC103146068,LOC102216674,LOC106516864,LOC103479788,LOC107094235,LOC102787357 coding downstream 45396 18279102 ~ 18281820 (+)
loxl5b NA coding downstream 54377 18288083 ~ 18293040 (+)
myo9b NA coding downstream 94552 18328258 ~ 18360230 (+)
G115660 LOC102296215,LOC102788438,LOC100704618 non-coding upstream 58546 18171679 ~ 18174071 (+)
G115636 tpm4,LOC107383605,LOC103146061,LOC102218802,LOC103479776 non-coding upstream 167379 18060709 ~ 18065238 (+)
G115633 LOC102219409,LOC104931433,LOC103479775,LOC104950312,LOC105022474 non-coding upstream 174374 18052868 ~ 18058243 (+)
G115600 NA non-coding upstream 212507 18019905 ~ 18020110 (+)
G115599 ranbp3,LOC102787870 non-coding upstream 213003 18016563 ~ 18019614 (+)
G115690 NA non-coding downstream 37 18233743 ~ 18234058 (+)
G115705 NA non-coding downstream 28690 18262396 ~ 18262661 (+)
G115723 NA non-coding downstream 62440 18296146 ~ 18297509 (+)
G115733 NA non-coding downstream 145406 18379112 ~ 18385969 (+)
G115781 NA non-coding downstream 220327 18454033 ~ 18455620 (+)
LOC120567767 NA other upstream 202722 18027280 ~ 18029895 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other upstream 749064 17406497 ~ 17483553 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other upstream 1620411 16610376 ~ 16612206 (+)
LOC120568419 LOC102779359 other upstream 1704935 16439025 ~ 16527682 (+)
LOC120568164 LOC104950913,LOC104937610,LOC103355754 other upstream 2004066 16226307 ~ 16228551 (+)
G115729 NA other downstream 71443 18305149 ~ 18354344 (+)
skila skil,LOC102782637 other downstream 332927 18566633 ~ 18602263 (+)
LOC120568691 NA other downstream 426723 18660429 ~ 18674140 (+)
LOC120568911 NA other downstream 486659 18720365 ~ 18725447 (+)
LOC120568770 NA other downstream 783333 19017039 ~ 19052242 (+)

Expression


Co-expression Network