LOC120568342


Basic Information

Item Value
gene id LOC120568342
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3718266 ~ 3721122 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640708.1
GTGCTGCAGCGGCCTGGCTTGCTCATCTTCTCCCTTGGTGTTGCTGCTGACTGGATCTCCTGTACCCTGGTGGAGCTGAATCCCAGACTCTGCAGTGAAGTGGTCCTTTTCTCCCACACTGATGCGTGGtgacgtccctgGACTCGGCTATTCAAAGCCCCGCTGAAGCAGATATTCTGTGCCGGCGCCAGGAGAAACACGGAGCTGACTCCAGGCTGGACTGGACTTGGTTGTTGTTTCACCCTGGGACAGAATATTGGACAATCCATGGTTCTATTGTCTCCCCTGGTTTTTGAGGAGATTGTGATTTTAATGTCAGTTTAAACTTAACTTTTAAACTATTAAAATGGCTGGGAGTCTAAa

Function

GO: NA

KEGG:

id description
ko00140 Steroid hormone biosynthesis
ko04913 Ovarian steroidogenesis
ko04927 Cortisol synthesis and secretion

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640708.1 True 363 lncRNA 0.50 2 3718266 3721122

Neighbor

gene id symbol gene type direction distance location
LOC120568323 NA coding downstream 12096 3671550 ~ 3706170 (-)
LOC120568006 NA coding downstream 463897 3234368 ~ 3254369 (-)
LOC120568004 NA coding downstream 517413 3183582 ~ 3200853 (-)
LOC120568011 NA coding downstream 536961 3158202 ~ 3181305 (-)
LOC120568007 NA coding downstream 828527 2867255 ~ 2889739 (-)
LOC120568526 NA coding upstream 26175 3747297 ~ 3751140 (-)
LOC120568321 NA coding upstream 28335 3749457 ~ 3760667 (-)
LOC120568324 NA coding upstream 140207 3861329 ~ 3871815 (-)
LOC120568530 NA coding upstream 162634 3883756 ~ 3889916 (-)
proca NA coding upstream 251210 3972332 ~ 3983995 (-)
G111960 NA non-coding downstream 16466 3675497 ~ 3701800 (-)
G111935 NA non-coding downstream 25764 3495593 ~ 3692502 (-)
LOC120568339 NA non-coding downstream 25803 3691144 ~ 3692463 (-)
G111961 LOC102295145 non-coding downstream 34654 3683304 ~ 3683612 (-)
LOC120568334 NA non-coding downstream 99852 3615179 ~ 3618414 (-)
LOC120568335 NA non-coding upstream 79073 3800195 ~ 3821190 (-)
G111997 NA non-coding upstream 246872 3967994 ~ 3969218 (-)
G112007 NA non-coding upstream 318762 4039884 ~ 4040197 (-)
LOC120567799 NA non-coding upstream 353607 4074729 ~ 4082082 (-)
G112018 LOC102799398 non-coding upstream 369386 4090508 ~ 4138931 (-)
LOC120568325 NA other downstream 84867 3629565 ~ 3633399 (-)
LOC120568522 NA other downstream 132740 3564546 ~ 3585526 (-)
LOC120569104 NA other downstream 261732 3445400 ~ 3456534 (-)
LOC120568520 LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200 other downstream 346491 3314646 ~ 3371775 (-)
LOC120568005 NA other downstream 489119 3204287 ~ 3229147 (-)
G112043 NA other upstream 516980 4238102 ~ 4238670 (-)
G112046 NA other upstream 546416 4267538 ~ 4284083 (-)
G112233 NA other upstream 1942882 5664004 ~ 5668687 (-)
LOC120568546 NA other upstream 2002611 5723733 ~ 5746081 (-)
G112328 NA other upstream 2072041 5793163 ~ 5852447 (-)

Expression


Co-expression Network