LOC120568401


Basic Information

Item Value
gene id LOC120568401
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 9467298 ~ 9469320 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640716.1
agattcactcaaaaattattggtcttataaaatctaagtaagataaacaacatagcaagataatatatttacttttaGGCTGAAATCAATTTTGCTAAAAACTGtacttttgtgcttgatttcgttgttttaactgtattaggtgaaaatacttaaaacaagaatctATCGATTTTCACAACTAAGACAATTCACTTCTTCCTTTTCACTTCTAACAAGTGGCTCAATCAGTGTTTAAATCCAACCGTTACACCCCCCCGCCAGTAGGGGAAGACCgtgcctctgctctcaggtgaccGATTCAAGTCCTGTCCTCCGGACTTCCGTTTGCGTTTGATATGATACACCAACGAACAAAGAAAGAAGATTTTATTTGCTTCGCCAAACGATCACACGAAAAAatgacTCCAGTCCACAAGCAAGAAAGCGTTCCAGGACGGAGCGTGTGTCTGGAAGCCCTGTCTGTCAGTATACATCACTGCCACCACCACCTGcatATGAGTCAACACCACACAGGAAACCAGCCGGTCGCCCAGAGCTGGATGGGTGTATTCTAACGCAAGCTCGGCCTGCCACGTCATCTCGGGACCCAGTTGAAGcaacttttcCTGACAAGCCCGGAGGTTCGACCGGAGGTACTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640716.1 True 642 lncRNA 0.44 5 9467298 9469320

Neighbor

gene id symbol gene type direction distance location
LOC120568395 NA coding upstream 40751 9359620 ~ 9426547 (+)
tox tox,LOC106524915,LOC101481153 coding upstream 127680 9287153 ~ 9339618 (+)
ca8 ca8 coding upstream 210605 9235285 ~ 9256693 (+)
LOC120568720 ptbp2,LOC103370128,LOC106917804,LOC102234855,LOC102779238,LOC105008310,LOC107570490,LOC105910816 coding upstream 374022 9071636 ~ 9093276 (+)
LOC120568868 NA coding upstream 397045 9065585 ~ 9070253 (+)
dars2 dars2 coding downstream 41862 9511182 ~ 9521842 (+)
bpnt2 impad1 coding downstream 53850 9523170 ~ 9534035 (+)
trnaq-cug_7 NA coding downstream 68760 9538080 ~ 9538151 (+)
trnaq-cug_8 NA coding downstream 69356 9538676 ~ 9538747 (+)
trnaq-cug_9 NA coding downstream 69811 9539131 ~ 9539202 (+)
G113290 NA non-coding upstream 92193 9374449 ~ 9375105 (+)
G113274 NA non-coding upstream 197751 9269347 ~ 9269547 (+)
G113273 NA non-coding upstream 209715 9257323 ~ 9257583 (+)
G113240 NA non-coding upstream 304753 9153001 ~ 9162545 (+)
LOC120569003 NA non-coding upstream 420866 9037893 ~ 9046432 (+)
G113306 NA non-coding downstream 172 9469492 ~ 9470097 (+)
G113337 LOC103364124 non-coding downstream 204385 9673705 ~ 9683738 (+)
G113338 LOC106931405,LOC106965048,LOC102781692,LOC103146972 non-coding downstream 221168 9690488 ~ 9702650 (+)
G113429 NA non-coding downstream 342660 9811980 ~ 9814242 (+)
G113446 NA non-coding downstream 373381 9842701 ~ 9843483 (+)
G113130 NA other upstream 464730 8944477 ~ 9002568 (+)
pdca LOC103370803,LOC104933924,LOC101478313,LOC102200750,LOC100699795,LOC102301525 other upstream 564451 8895927 ~ 8902847 (+)
LOC120568881 mfsd12,LOC104931866 other upstream 641487 8812897 ~ 8825811 (+)
LOC120568415 LOC103370799,LOC104931865,LOC101476899,LOC102794599,LOC102300092 other upstream 657839 8789209 ~ 8809459 (+)
atg10 atg10 other upstream 752027 8708661 ~ 8715271 (+)
LOC120568835 NA other downstream 1416275 10885595 ~ 10886478 (+)
pkia pkia,LOC102780447,LOC102205080 other downstream 1863248 11332568 ~ 11346225 (+)
abhd4 abhd4 other downstream 2653349 12122669 ~ 12128022 (+)
LOC120568189 nop9 other downstream 2688129 12157449 ~ 12166277 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other downstream 3113322 12582642 ~ 12599840 (+)

Expression


Co-expression Network