LOC120568563


Basic Information

Item Value
gene id LOC120568563
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 32330829 ~ 32352681 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640733.1
GTTCATGTACTTCCTTATTTTTATCGTTCCTCTCTAAACTCTGCTATAAGGCTCGATATCTGTTAAATTCAATCCATCATCAAGGAAGCAGATTTGAACATTGAAGTCGGTGAAGAGCACTGCAGTCTCCTTTGGGGAGACTATGATGGAGGACTTCAGGCAGGATGGACAGTGAGCTGAGAGAGTGACTGTTTGAAGATCATAGTAAAGAATCCCACTAGCTGGTCTGCAAAGTCCTTCAGTGCATATCCGCAGACGGCATCAGGGCCGGCCACCTTCCGCGAGTTGACTGTCTCTGGGTACGCCTCACCTCATGCTCCTCTACCATGTGGATGGTGTCGCTGTGGGCTGCTGAATGTGGTGTGGCTGCCTCTGGTGGTTTAACCTCAAAGCAGCCCTCAATACCGCTCCTCCACCACAGGATGGCGACGGCAtcaaacagaagaaaaacacaaccCACTTGACGACTTCTCTGCCTCGGAGACACAAAGCCTGTGACATCATCTGCGGAGGGACAGAGGGTGTGCGAAGGACAAATGTCCTGAAATGCATTACATCATTCTGCACTAATATGATAATATATCTCAGGCTGTGAGTGCGGTGCCAAGCATGAGAGGGGCCATAATCCATACGACTGCTTCAAATGTGAACAAGGGGATAAAATGAAAGTGGACGTGGTAGTGGAgaagtaggggggggggggtctgctGGAGTCGGGAGTGCAGTGCTGAAGGTTATTCCAGACATTATTCTTCAATGagagcaggaggagagaggagaggatcaTCACTATTACACACTAAGTAAAGATGAGGAAGGGAGGCTAAAACGCTTCCTTGTCTGTCTTCTGTCCTTGTCCTTCTTTTTCCTGTCATatctgttctttctttcttgctttCGCTTTTTCTCAACCCTCATTTTTCCTGTCattcagaggagaggaggaccgaggagagaaaggagacaAAGATGTGTAAGAAAAAGGTTGCAGAGTCGAAAGAAGGACTGACAAGTCGCAAAAGGGAGGATTTGAAAAGGATGTAAGAGGtgagagagtgagggaggagaagaATTGAGAGAGGAGAGGTGAGGAAATGAGAGGAAACAGAagaatgaaaagagagagattggGAGAAAAAGGTAGACAATGGGAGaaaaggggagaggaggagaaagttGGAGAGAATTGAAGAGCTACCGCAAAATCTAAAAAGAGGAGAGGTGAGAGGATGAAtaaggagaaaaaaagcagaaaggaAGAGCGAGGGAAGATgcaaaggagaggaggaaaaagtTGCTGTGATGTGAGAAGAAGTGACAACATGAGGTtagggaagagaggagaggagaagggaaAAGATGAGGCAGGAGAGGTCGGACTTTGTAGAGACAAAACAGTTAGAAGATGTGAAAGGAGGACTGAGAAGAGGAAATAGGAGAGGAGATCAGAGGAAGGacagagagatgagaggaggaGGTAAGGAGGTGAAcagagaaaatgtgaaatgagGAGTAAGGAGTGGAGAGACGAGGGTAGGGGACATGAAAGAAGGACTGAGGACACAGCTTAAAGAGAAATCATTGAAAtgggaagaaaacaaagaagaaaagggGAGGTGAGGatagaagaagagagagaggtgaaagTAGGGTTTTTGGGGTTTTCAAAGTCCCTTTATTTGATCATTTTCAGAGAAGaattacaataacaaaaaaacaaaaaggactcAGAACATGTAGAAGAAAAACGCGGGAGAGGTGGAGAAGGTAATGTAAAAAGGAATGAGAAGATGAGGCAAAAGAAGAGGACTACAACACTACATGGACggagggaaaagagaggaaaaaagaggagagagaggatgatTGACAATATGATGCAAGGAAAGATGAAAGATCAGACAGTACGAGAAGTGAAAGGACAGTAGGAGAGGAGAAATGAGAAAAAAGGATGACAGAAGAGGGTAAGAGAGGTGAAAAGAAGGGAAAGGAGAAGGTTGGAGATGTTAGGGAAAAACTGGGAAGATGATGCATGGCTGAAGaaaccaaatgaaaaaagagaggaggagacgaGATGTGATGTGATAGGAGGACTGAAGAGAAGAAgtagaaggagaggagaggaggacacagggcaaagcaaaacaaagagacaAGGCGAAGgagtgaaagagaagaagaaaggagagacaaaatggagaaagaagaaaggaaaaggtTACAAAGATGAGATGAGGACTAACAGGATGATTTAAGGAGAGAGAGCAAAGACAAGactgaaggagaggagaggagaggagaggagttgcTCTGCATGTTTTTCATGTGCACAATGTCTTCTTTTGCCATTTCCAGCCACAGCTGTTAGTAAAGTTTAATGCTTTTCTGATGCTTTCGACTGGTTCtcttactgcaggggggccaccaaattattgataatttttttgaaagttgttttcaaaaaatgaaaatgtcttaacatgaatccaacagaTATAAATCAGTCTATTTGTGGAGAAAAAAAcccattgatgataggcttacagacctgtaggtaaggtagtcTCTAAAGCCAGCCACATACAGTTcataaggattcactgtgccacatgttttttaacattaaaacatgatttataaaatcatgccaacaattattttatcagcttagtattct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640733.1 True 2677 lncRNA 0.44 3 32330829 32352681

Neighbor

gene id symbol gene type direction distance location
LOC120568891 NA coding downstream 464132 31865738 ~ 31866697 (-)
kcnj9 LOC101477758 coding downstream 470751 31838382 ~ 31860078 (-)
LOC120569109 LOC104940918,LOC103370533 coding downstream 509405 31802504 ~ 31821424 (-)
LOC120568044 LOC103370525 coding downstream 531491 31714287 ~ 31799338 (-)
LOC120568655 LOC107092454 coding downstream 620038 31696803 ~ 31710791 (-)
LOC120568565 NA coding upstream 136136 32488817 ~ 32513982 (-)
LOC120568566 NA coding upstream 171861 32524542 ~ 32538091 (-)
LOC120568564 kcnj10,LOC100694690,LOC101485288 coding upstream 185516 32538197 ~ 32555689 (-)
LOC120568447 NA coding upstream 241977 32594658 ~ 32600456 (-)
LOC120568440 NA coding upstream 250462 32603143 ~ 32614898 (-)
G119472 NA non-coding downstream 757 32326772 ~ 32330072 (-)
G119455 NA non-coding downstream 206339 32123339 ~ 32124490 (-)
G119394 LOC104960271,LOC108428278,LOC103396779,LOC106525269,LOC103358974,LOC102300463 non-coding downstream 220312 32105344 ~ 32110517 (-)
G119368 lig1 non-coding downstream 364603 31949459 ~ 31966226 (-)
G119358 NA non-coding downstream 411702 31918039 ~ 31919127 (-)
G119479 NA non-coding upstream 50845 32403526 ~ 32419889 (-)
G119482 NA non-coding upstream 65282 32417963 ~ 32418995 (-)
G119492 NA non-coding upstream 86146 32438827 ~ 32454048 (-)
G119523 NA non-coding upstream 213291 32565972 ~ 32566391 (-)
G119528 NA non-coding upstream 217316 32569997 ~ 32570682 (-)
G119465 cadm3,LOC106600493 other downstream 104469 32216502 ~ 32226360 (-)
G119379 NA other downstream 279390 32047477 ~ 32051439 (-)
zeb1a LOC103364416,LOC100701828,LOC102292734,LOC101079552 other downstream 755636 31469595 ~ 31575193 (-)
LOC120568745 NA other downstream 873672 31455599 ~ 31457157 (-)
G119169 NA other downstream 1159219 31169922 ~ 31171610 (-)
LOC120568568 NA other upstream 11780 32364461 ~ 32374518 (-)
fcer1gl NA other upstream 408288 32760969 ~ 32765211 (-)
LOC120567697 copa,LOC103137970 other upstream 475683 32828364 ~ 32832509 (-)
G119631 LOC104961532,LOC101466547 other upstream 497038 32849719 ~ 32865274 (-)
zgc:66427 LOC103370245 other upstream 626525 32979206 ~ 32988559 (-)

Expression


Co-expression Network