LOC120568573


Basic Information

Item Value
gene id LOC120568573
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 32504212 ~ 32505293 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640736.1
TTCTTCAAAGGCCTGCTACACACTCACATTTTGTCAGAAAAAACAAAGCTTGCAAACACTATACAAGAGATGTTGTGTGCTTGCCTTTTTCATCAGCATCAACAATTCGCATTCCAAGGGGAGACTCAAGAGCAAATTTGGCACGAGATGGCCTTATTGGGAAGATCTCCTTTACATCTGACTGGTCTGAAGCACAACTTAAAGAAGAAATGACCGGCCATTTTCAGAAGAACGTTTGCATTGTCTATGCATTGTCTATGGGCCAGTCATTCCCATTCGAGTATTTGAGTACAGTCAAGGGATGCAAAAGACTAATGAAACCAAACGTCTCGAGCAGTTTTTTGTGAGGTGGAAAAGAAGTTGCCTCGATTAGTTCAGCCACTTGTCTCTATATAATGGCATTAATACGCAAACCTGTACAGGAGGAACCTGAGGAACTCTCCAATAGTGACTTTGAAAGTCCTGTGGGCTGGAGAAGGAGAGTTCATACAGTGTCACCTTCCACAAGTGAAAGTGAGCTCATCAGTCAAGGGAGTGAAAATGACAGACTGCAAGAAAGTCCATCGCGTCAAAGAAGAAGTAGGTTAAGcccacccctgctgctgcaggcaaagcatagctcgttagctcagcaagcaagcaacatgtcggtaaaggatattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640736.1 True 663 lncRNA 0.44 3 32504212 32505293

Neighbor

gene id symbol gene type direction distance location
LOC120568570 NA coding upstream 17804 32472620 ~ 32486408 (+)
LOC120568571 NA coding upstream 63117 32437458 ~ 32441095 (+)
LOC120568561 NA coding upstream 148390 32347289 ~ 32355822 (+)
kirrel1b LOC101488125,LOC102302400,LOC100705859 coding upstream 178565 32232208 ~ 32325647 (+)
trnar-ucu_14 NA coding upstream 377782 32126357 ~ 32126430 (+)
LOC120568820 LOC101162955,LOC103374738 coding downstream 70020 32575313 ~ 32586349 (+)
si:ch211-155e24.3 si:ch211-155e24.3,LOC108427093,LOC107549816,LOC107750208,LOC107671805 coding downstream 146011 32651304 ~ 32656857 (+)
LOC120568452 LOC103367094 coding downstream 211460 32716753 ~ 32721611 (+)
myadmb LOC104961532,LOC101466547 coding downstream 337806 32843099 ~ 32852397 (+)
ltb4r2b NA coding downstream 424158 32929451 ~ 32938337 (+)
G119417 NA non-coding upstream 100501 32372563 ~ 32403711 (+)
G119416 NA non-coding upstream 139444 32364566 ~ 32364768 (+)
G119415 NA non-coding upstream 154499 32348121 ~ 32349713 (+)
G119409 NA non-coding upstream 162849 32341125 ~ 32341363 (+)
G119398 NA non-coding upstream 379297 32124564 ~ 32124915 (+)
G119453 kcnj10 non-coding downstream 43851 32549144 ~ 32555738 (+)
G119519 NA non-coding downstream 58548 32563841 ~ 32564486 (+)
G119541 NA non-coding downstream 128335 32633628 ~ 32634719 (+)
G119556 NA non-coding downstream 204002 32709295 ~ 32710372 (+)
G119579 NA non-coding downstream 252090 32757383 ~ 32757653 (+)
LOC120568569 NA other upstream 32642 32452705 ~ 32471570 (+)
cadm3 cadm3 other upstream 277729 32128458 ~ 32226483 (+)
LOC120567694 LOC103373937,LOC106569580,LOC100136182,LOC107383461,LOC106960171 other upstream 432900 32067563 ~ 32071312 (+)
pip4p1a tmem55b,LOC101161334 other upstream 589508 31888908 ~ 31914704 (+)
dnaaf6 pih1d3,LOC106903480,LOC103138000,LOC103138005,LOC103137996,LOC106960166 other upstream 634717 31865755 ~ 31869495 (+)
G119582 vangl2,LOC103137974 other downstream 263414 32768707 ~ 32769852 (+)
G119584 vangl2,LOC102795188 other downstream 269781 32775074 ~ 32775682 (+)
G119585 NA other downstream 275695 32780988 ~ 32781471 (+)
tep1 LOC104950563,LOC104941471 other downstream 483524 32988817 ~ 33049081 (+)
LOC120568463 NA other downstream 658623 33163916 ~ 33166100 (+)

Expression


Co-expression Network