LOC120568643



Basic Information


Item Value
gene id LOC120568643
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 6388094 ~ 6392982 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XR_005640739.1
AACGTTGTGGAAAATGAGGGATTTTGTCACTTGCTAAAAACACTGGAACCAAGGTCGTAATCTCCcaggaaaggaggagaggaaaataaCATCTCTATAGCAACGGCCGGTCTAAAGAAGGTGAGCCGTTGCGGTGCGGGAGAAGACGCAGAGCGACCACGGGCGCCCGGACACAAACGTGCACGTTCATGCTGGACACATGGTTTCCAAACTGATGTAGATTAGGTACAGCTGAGATACTTTGAGAGGGGGAAGAGCTCACGGTGGAGCAGGAGAACAGCACCGAGGTCTGACGGGAACAGGAACGTTGGGACTCATTTAACCAGCGTTAGAGAAATGCAAAATGAGAGAAACATCTATGTGAAATTACTTTCAGAATGTctggtttgttttatttttacagcacGTATTAAAGAAACTGACTGTTA

Function


GO:

id name namespace
GO:0050877 nervous system process biological_process
GO:0050953 sensory perception of light stimulus biological_process
GO:0007600 sensory perception biological_process
GO:0007601 visual perception biological_process

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005640739.1 True 428 lncRNA 0.46 2 6388094 6392982

Neighbor


gene id symbol gene type direction distance location
gtpbp4 gtpbp4 coding downstream 88123 6284160 ~ 6299971 (-)
LOC120569024 wdr37,LOC102795438 coding downstream 104596 6256300 ~ 6283498 (-)
trnas-uga_20 NA coding downstream 160310 6227703 ~ 6227784 (-)
trnas-uga_19 NA coding downstream 161348 6226665 ~ 6226746 (-)
trnas-uga_18 NA coding downstream 166997 6221016 ~ 6221097 (-)
LOC120568553 NA coding upstream 346276 6739258 ~ 6740436 (-)
LOC120568066 NA coding upstream 348116 6741098 ~ 6743701 (-)
LOC120568556 NA coding upstream 354472 6747454 ~ 6748819 (-)
LOC120568068 NA coding upstream 356478 6749460 ~ 6771396 (-)
LOC120568069 NA coding upstream 356478 6749460 ~ 6751778 (-)
G112462 NA non-coding downstream 28142 6359472 ~ 6359952 (-)
G112461 NA non-coding downstream 28765 6358079 ~ 6359329 (-)
G112460 NA non-coding downstream 30104 6356798 ~ 6357990 (-)
G112453 NA non-coding downstream 40241 6347335 ~ 6347853 (-)
G112381 NA non-coding downstream 271950 6113462 ~ 6116144 (-)
G112531 NA non-coding upstream 161 6393143 ~ 6400383 (-)
G112533 NA non-coding upstream 3708 6396690 ~ 6399552 (-)
G112537 NA non-coding upstream 46077 6439059 ~ 6439839 (-)
G112540 NA non-coding upstream 87096 6480078 ~ 6480789 (-)
G112577 NA non-coding upstream 219080 6612062 ~ 6612306 (-)
LOC120567959 NA other downstream 209208 6172281 ~ 6178886 (-)
G112328 NA other downstream 535647 5793163 ~ 5852447 (-)
LOC120568546 NA other downstream 642013 5723733 ~ 5746081 (-)
G112233 NA other downstream 719407 5664004 ~ 5668687 (-)
G112046 NA other downstream 2104011 4267538 ~ 4284083 (-)
zmynd11 zmynd11 other upstream 302628 6695610 ~ 6736512 (-)
si:ch211-267e7.3 LOC103370300 other upstream 563458 6956440 ~ 6990122 (-)
cdh6 LOC103366829,LOC104926815 other upstream 683627 7076609 ~ 7163670 (-)
trnak-uuu_16 NA other upstream 2094485 8487467 ~ 8487539 (-)
G113070 NA other upstream 2387470 8780452 ~ 8790042 (-)

Expression



Co-expression Network