LOC120568661


Basic Information

Item Value
gene id LOC120568661
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 17356351 ~ 17357209 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640743.1
gaaaataatgtcatgggcggggccacgttcctattggccagtcgggtgagcaccgtcttgtcttgggagtcgaactgaatcattacactGGCTGAGCAATGCCAGCCAGGGGTATCCAGATACATTGCGCAACAAGGAACAATGGCTGCCAGGTCGACCAGAGAGAcccataaatggacgcCGGAGGAAACCCAGCAGCTGATCCACTTTCTGGCTGAGAACGAGCAGTAATCATGTGTAATTCATTCCTGTTCATGTacctgtacattgttgttggttatgatacaggacactaatgaaagaaatggggttggagggaaaggttactggccaacaggcatcacactatggtctggaatttcagaatagctgtagttttgtttgtttgtggtcttgtgtgtcttttagttttatacatttgagtgccttttttaGTGTGACATCTAAGTTATTGTTCTAATAGTTGATAATGGTTCTCTACATTTTTCTataatgtttttgcatgttatgtttatttttttgggaaataaagactttttttaacaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640743.1 True 547 lncRNA 0.41 2 17356351 17357209

Neighbor

gene id symbol gene type direction distance location
LOC120567855 NA coding downstream 57427 17297055 ~ 17298924 (-)
LOC120568842 LOC103353955,LOC104931259 coding downstream 80562 17183162 ~ 17275789 (-)
LOC120569119 LOC101466820,LOC102797643,LOC103353954,LOC100700019 coding downstream 179940 17165891 ~ 17176411 (-)
LOC120567671 lrrc30,LOC104932041,LOC103353948 coding downstream 333958 17020735 ~ 17022393 (-)
LOC120568369 ptprm,LOC102799796 coding downstream 340725 16847810 ~ 17015626 (-)
LOC120569062 LOC103353959 coding upstream 135078 17492287 ~ 17542090 (-)
ndc1 ndc1 coding upstream 198771 17555980 ~ 17564537 (-)
zgc:113691 LOC103353967,LOC104931261,LOC102192286 coding upstream 207502 17564711 ~ 17567046 (-)
yipf1 yipf1 coding upstream 210143 17567352 ~ 17571388 (-)
tmem59 tmem59 coding upstream 218097 17575306 ~ 17579575 (-)
G115458 NA non-coding downstream 53793 17302264 ~ 17302558 (-)
G115435 NA non-coding downstream 191656 17164369 ~ 17164695 (-)
G115434 LOC103353952,LOC100690840 non-coding downstream 215134 17137754 ~ 17141217 (-)
G115433 abca4,LOC108232920,LOC100690840,LOC102789304,LOC102216210,LOC101466350 non-coding downstream 220538 17133873 ~ 17135813 (-)
G115430 LOC102789304,LOC101466350,LOC102216210,LOC102305671,LOC100690840 non-coding downstream 233293 17122722 ~ 17123058 (-)
G115563 dcaf8 non-coding upstream 191011 17548220 ~ 17552950 (-)
G115568 NA non-coding upstream 215688 17572897 ~ 17573129 (-)
G115570 lrrc42 non-coding upstream 216254 17573463 ~ 17574125 (-)
G115577 NA non-coding upstream 250247 17607456 ~ 17608257 (-)
G115624 NA non-coding upstream 608604 17965813 ~ 17967692 (-)
ly97.3 NA other downstream 247447 17039800 ~ 17108904 (-)
G115406 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 other downstream 311289 17043126 ~ 17045062 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other downstream 544433 16756331 ~ 16811918 (-)
G115312 ralbp1,LOC102778314 other downstream 716539 16637108 ~ 16639812 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other downstream 1020395 16330952 ~ 16335956 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other upstream 695775 18052984 ~ 18058159 (-)
sppl2 sppl2b other upstream 1123461 18480670 ~ 18494488 (-)
LOC120568909 LOC103353029,LOC104955147,LOC101484702,LOC102780695 other upstream 1345855 18703064 ~ 18720587 (-)
G115941 NA other upstream 1487696 18844905 ~ 18846277 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other upstream 1574765 18931974 ~ 18935491 (-)

Expression


Co-expression Network