LOC120568726


Basic Information

Item Value
gene id LOC120568726
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 15746177 ~ 15759108 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640758.1
tcCCGTGTTGTCACTGCATGGCTCCTAGTTGTCAAAAGTTAAATAACACAAACTGCGGTCACCATGATGTGGGTTATCTTGCACACATTTTAAAGTCTGCCTTTTGATGAAGAATTTGAGATGAAACTACCAGCCTCGGGATATTGTTATATCTGACCAAGCTTTCAGAATCACAAGCGTCTTTCTTAGAGGATTACCAAACATGAAAACAGCAGGATAACAAGGGTCGCATGGGGCTGGATTGGGTGCGATGCGGGGACAGAAAGACACCCTGGAGAGAAAGCCAGTCAATCAAAGGGCTGACACATAGAGACAGCCAGCCAGCCATTCACACTCACATTTACACCTACAGGCAATTAGAGTTGCCAATTAGCCTAACATGCATGTCTTTGGACTGTGGGAGGAAGCCGTTGGCCCCAGAGAAAAACCACGCTGACATGGGCTACCCAGAACCTTCATGCTGTGAGGCAACGGTGCCAACCACTGTACCACCGTGATGCCCCCCTTTAATACATCTATTAATGTGTGACCAGTCTCATCCACACTGATAGTCAGTGAAGAGCGACTTGTCTCCATCAGCTGGGAACCTTCAccagtgtctttgtgtgtgcgtctgtcagCACAAGAGGAGGGTTTCAGGCATCATCACTCAGGCATCCTCTTACTGGGCTCACTGGACTAAAGCCTGGGAACCAGACCAACAATCGCCACTCTCATTAAGCAAATGGACCCAGGAAGGCAGACTGCTGCTGAACTCAATTACAACCTCCCATACAGGCAGGCAAAACACAAAGgcagcatctgaataacgtgaTGGTGAAGACGGACAGGATGTTTGCCAGTTGACAGTAAAGAGCAACAAGTAGCGAAACAAGAGGATGACCTGAAACAAAAGTCCCGGACTTCAAAAGAGAACTTAGCTAAATGAG

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640758.1 True 929 lncRNA 0.48 6 15746177 15759108

Neighbor

gene id symbol gene type direction distance location
rabggtb rabggtb coding upstream 949 15737192 ~ 15745228 (+)
acadm acadm coding upstream 12662 15725767 ~ 15733515 (+)
LOC120567732 rps8,LOC104932872 coding upstream 21789 15720938 ~ 15724388 (+)
LOC120569145 NA coding upstream 22380 15723729 ~ 15723797 (+)
LOC120569144 NA coding upstream 22974 15723135 ~ 15723203 (+)
ak5 ak5,LOC102787869 coding downstream 197251 15956359 ~ 16031840 (+)
miga1 miga1 coding downstream 319379 16078487 ~ 16093938 (+)
dnajb4 dnajb4,LOC102785119 coding downstream 354132 16113240 ~ 16118518 (+)
gipc2 gipc2 coding downstream 360460 16119568 ~ 16136858 (+)
LOC120569020 btf3l4,LOC100695932 coding downstream 384999 16144107 ~ 16148770 (+)
G114998 NA non-coding upstream 68834 15677093 ~ 15677343 (+)
G114991 NA non-coding upstream 120854 15625102 ~ 15625323 (+)
G114944 NA non-coding upstream 196257 15549129 ~ 15549920 (+)
G114909 ripk2 non-coding upstream 290802 15444478 ~ 15455375 (+)
G114905 NA non-coding upstream 308424 15436104 ~ 15437753 (+)
G115055 NA non-coding downstream 84046 15843154 ~ 15848292 (+)
G115095 NA non-coding downstream 334902 16094010 ~ 16097398 (+)
LOC120568625 NA non-coding downstream 344610 16103718 ~ 16107792 (+)
G115103 NA non-coding downstream 377057 16136165 ~ 16138828 (+)
LOC120568989 NA non-coding downstream 450802 16209910 ~ 16216365 (+)
slc35a3b LOC103357859,LOC104957008,LOC101481522,LOC102792347 other upstream 177683 15554471 ~ 15568494 (+)
zgc:153115 klf13,LOC104948390,LOC103358333,LOC101073550,LOC105030379,LOC106568757,LOC107752329 other upstream 217408 15520782 ~ 15528769 (+)
asip2b agrp2,LOC105941385,LOC102299529,LOC102795060,LOC103358555 other upstream 267715 15472702 ~ 15478462 (+)
LOC120568540 LOC108238308,LOC100706341,LOC103359463,LOC106530177,LOC102798013,LOC101474556,LOC102303803 other upstream 377397 15338557 ~ 15368780 (+)
G114789 NA other upstream 588978 15151796 ~ 15157199 (+)
st6galnac3 st6galnac3 other downstream 5575 15764683 ~ 15843094 (+)
st6galnac5a st6galnac5,LOC103370426,LOC102788813 other downstream 106478 15865586 ~ 15921531 (+)
LOC120568164 LOC104950913,LOC104937610,LOC103355754 other downstream 467199 16226307 ~ 16228551 (+)
LOC120568419 LOC102779359 other downstream 679917 16439025 ~ 16527682 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other downstream 851268 16610376 ~ 16612206 (+)

Expression


Co-expression Network