LOC120568776


Basic Information

Item Value
gene id LOC120568776
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 19619229 ~ 19624184 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640784.1
tctccatagGCCTATGTCACGCAACACTTGAAGACCAGAAGAACGTCTCTGAGGGATACGGCTCTTCCGGTTAGCTTTTTACAATGGCGGAGCCCGATAGATACCGCTGGACCAAGTCTCTCCGCAACCTGCCTGAAGTCACCTACGACGATGTGGTTCGGATTGTAAATGAACACTCAAGTAGAAACGTCAAAACTGAGGAAGGGATACAAGTTCTTCTGGGAGAAATTAATTTTCAATTACAGAGACGCATCACTACATCTTCACAGGGGAGAAATGCGTGCCAACACTTCCGTTGTACACCAGTGAGCTTCAGTCATGGCACCGACCAAGGACACAAGTTTttttctccAGGGGATTCGCCGGGAACCCATGGACCAACTTGTGGTGAGGAAACCCAAGGCACCTGGACGCAGTAGTGTCAAATCAACACTGTATTGAGTCTACGCAGGTAAGTGCTGTATATGTATCATTTAATTAATTAGGACATAAAAATATGGTCTACAAGTTCAAAAGAAGAGACCCTGACGTGTAAAACATTTAATGATTAATGGTTCCTGTTACTTGTCTTTGTAAAACCCCTTCCTGACCCTGCATTGTTGTCTGTTTGAGATGAACTGCGAGAACTTCGACCTCAACCTGGAATATGCAAGATCGTATGTGACCTGGCCGACCTAACTTTAGTGGAATCTAAGATACTAAGATTTGGGCCAGTCCCTCAAGGTTCCGTTATGTCTTATCAATGCTCCCCAGAAATATCCAAAGAAATCATTAAGCACCCAGAAGCCCCCTCATTCCCACAACTCCCCTTGTTAGGCTATACATTTAAACGACACCTACAGTTTGTTTCCAATTACCTCCAGTTTTATCACTTGCAGAGTTTAGAAGTCACCTCTGAATTGACTAGTTTAGGGTCTAATTGAATAGCATACAAGGGGGCAGTCAGAGAACCCTATGTGGAAGGCTGTCCGCCAGCCCCGTTTAACTTCCAGTAGATTTGGTGTTTACTCTGAGAGGGGAGTCCTCTGCTCAGGCTCTCGCAGTGAGGATCATGAAGGGGGTATGGCAACCACCTGCCATGAAAAGGGGTATCGACCTTGAGCCAGAAATGTTAAATCAGTACAGTGACCAGTGTAATGTCAATGTCTTCCCTTCTGGATTCATTGTTCACCCTAATGCATTACCTCGGGGCTAGCCCTGATGCAAGGGTGTATAATCCCACTGCATTAAGTTTATTAATGGTAAGGccaaacaaaaagaaaccaCACAAATATTACTGCCAAGTGCAAGGCCAGTTAGCCATCACTGGTTTGTCATGGTGTGATTTCATAACATCAACAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640784.1 True 1343 lncRNA 0.45 3 19619229 19624184

Neighbor

gene id symbol gene type direction distance location
LOC120568599 LOC107383795 coding upstream 3375 19603644 ~ 19615854 (+)
rgs20 rgs20,LOC103361426,LOC100710193,LOC102795665,LOC101473767,LOC107098286,LOC104917737 coding upstream 26665 19579117 ~ 19592564 (+)
trnar-ucu_13 NA coding upstream 102284 19516853 ~ 19516945 (+)
myl12.2 LOC107098295,LOC102237517,LOC103361564,LOC101069867,LOC103135689,LOC103479826 coding upstream 105767 19510386 ~ 19513462 (+)
adcyap1b prp/pacap,LOC104943411,LOC108232947,LOC103135685 coding upstream 352959 19260195 ~ 19266270 (+)
LOC120568742 vim coding downstream 15324 19639508 ~ 19646524 (+)
pde1cb pde1c,LOC108232872,LOC103135697,LOC103479836,LOC102794047,LOC100712431,LOC103361422 coding downstream 24235 19648419 ~ 19751633 (+)
neurod6b neurod6,LOC102793566,LOC102311402,LOC101472195 coding downstream 145105 19769289 ~ 19772164 (+)
LOC120567771 NA coding downstream 178807 19802991 ~ 19826972 (+)
LOC120567775 adcyap1r1,LOC103396405,LOC102193585,LOC100710985,LOC104917732 coding downstream 230804 19854988 ~ 19882428 (+)
G116128 atp6v1h non-coding upstream 51211 19554787 ~ 19568018 (+)
G116117 NA non-coding upstream 102604 19515535 ~ 19516625 (+)
G116115 NA non-coding upstream 111088 19507899 ~ 19508141 (+)
G116114 LOC104962928 non-coding upstream 115396 19503129 ~ 19503833 (+)
G116113 NA non-coding upstream 117931 19500420 ~ 19501298 (+)
G116168 NA non-coding downstream 3070 19627254 ~ 19627619 (+)
G116174 NA non-coding downstream 13694 19637878 ~ 19638123 (+)
G116175 NA non-coding downstream 13986 19638170 ~ 19638412 (+)
G116200 NA non-coding downstream 128309 19752493 ~ 19754448 (+)
G116204 NA non-coding downstream 208939 19833123 ~ 19834373 (+)
emilin2a NA other upstream 153848 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 566987 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 893782 18720365 ~ 18725447 (+)
LOC120568691 NA other upstream 945089 18660429 ~ 18674140 (+)
skila skil,LOC102782637 other upstream 1016966 18566633 ~ 18602263 (+)
LOC120567833 gbg5 other downstream 749043 20373227 ~ 20375633 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other downstream 1258433 20882617 ~ 20915322 (+)
LOC120568354 NA other downstream 2246769 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 2983865 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 3017326 22641510 ~ 22681293 (+)

Expression


Co-expression Network