LOC120568796


Basic Information

Item Value
gene id LOC120568796
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 33715393 ~ 33718251 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640786.1
AACTGTCTACTCCATTTAACTATACATAGGATGGGTGGGAAGCTGcaggcgccaaggaaaaaactCCAGTTCTTTTTGACACTAACCTAACAGACATGTTTTTGGTGGTGGGACGAAACACAACACgggaacatgcaaactccagaACAGAAAGGCCCTGCCCAGGGATCGAACCCCAGTACTCAGAAATGCTGAGTCACTGGGGCTCCATGCCACCCGAATAGGCgattcctctctaactgggacgttttgggaccggttggtgggattgctgtggacgaggTCCACTCgttgatacactgGTCCTTGTCTTTCTCCTGGGCgtcctgctctctgttccttaCCTCACCTTGCAGAGAGGCCCGGGCTCGTTCCAGCTGCTGCTCCAGACTGGACACCTGCGGACAAAAACAACATGAGCGtccatgtttatttttaaaaaaaaggtagaaaGCTAATGAGATCCCAGGGAATTAAGAACGACACTAAAGAAACCCTCAATTCTAATGAAGGAACAGTGTCTTGTAGTGTAGGCTTGACTTCATTCTCAAAACTATGAAAACTAAACACTCTCTCcctacaggcaatctgatatcTTGTCTGTTACCCAGAACAAACCTTCATGTATACTTCATGTCCCTGTATGGCTCTGCTCACTGAATGGAGACCGTTGTGCTCTTTTTGTTATGAAGGACAGAAAGCaaaatcagctgttcaaatgTGCCGAACTATCAAATACATCCCTCAGGCAATGAGACTGATTGAAGTTTGTGATATGTGTGGGGAGACAGTAAGTCTGCATATTAAGAGTACTGCTATACTTACAATTATCCTCTGCTTCTGCTTGCTAATACAATTTACagcttcaataaaaaaatgtcaatctTT

Function

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640786.1 True 888 lncRNA 0.45 2 33715393 33718251

Neighbor

gene id symbol gene type direction distance location
dipk1aa LOC104920940,LOC103355123,LOC100700149 coding downstream 35606 33664713 ~ 33679787 (-)
glmna glmn,LOC102782615 coding downstream 92971 33611613 ~ 33622422 (-)
znf644a znf644,LOC103355709 coding downstream 137551 33561200 ~ 33577842 (-)
gtf2b gtf2b coding downstream 182681 33520706 ~ 33532712 (-)
LOC120567699 NA coding downstream 314070 33385763 ~ 33401323 (-)
gadd45aa gadd45a,LOC105919244 coding upstream 140319 33858570 ~ 33861288 (-)
nsun4 nsun4 coding upstream 231345 33949596 ~ 33955044 (-)
pif1 pif1 coding upstream 239768 33958019 ~ 33976815 (-)
LOC120567625 LOC104964778,LOC107104388,LOC103353835,LOC102303690,LOC102777524 coding upstream 290640 34008891 ~ 34034308 (-)
st3gal3b st3gal3,LOC106568968,LOC104920950 coding upstream 327747 34045998 ~ 34100666 (-)
G119982 NA non-coding downstream 30703 33636351 ~ 33684690 (-)
G119990 NA non-coding downstream 52860 33659342 ~ 33662533 (-)
G119983 NA non-coding downstream 71745 33639612 ~ 33643648 (-)
G119973 NA non-coding downstream 104006 33600970 ~ 33611387 (-)
G119916 NA non-coding downstream 159381 33555584 ~ 33556012 (-)
G120016 LOC105920460,LOC103479125,LOC106958286,LOC103149535,LOC106904251,LOC108244512,LOC106529836 non-coding upstream 19247 33737498 ~ 33767779 (-)
G120034 NA non-coding upstream 90269 33808520 ~ 33823583 (-)
G120039 NA non-coding upstream 112552 33830803 ~ 33853674 (-)
G120052 NA non-coding upstream 230269 33948520 ~ 33949194 (-)
G120096 NA non-coding upstream 319659 34037910 ~ 34038115 (-)
G119989 NA other downstream 56117 33654302 ~ 33659276 (-)
gfi1aa gfi1,LOC100698183,LOC101467858,LOC102203194,LOC102781835,LOC106958274 other downstream 65876 33645095 ~ 33649517 (-)
selenof selenof other downstream 281468 33421389 ~ 33433925 (-)
LOC120568437 NA other downstream 458456 33217190 ~ 33256937 (-)
zgc:66427 LOC103370245 other downstream 726834 32979206 ~ 32988559 (-)
G120168 LOC105912833 other upstream 510375 34228626 ~ 34229050 (-)
G120230 NA other upstream 682572 34400823 ~ 34404013 (-)
LOC120568808 LOC103366832,LOC103395886,LOC104944844 other upstream 1068917 34787168 ~ 34792767 (-)
G120390 NA other upstream 1177328 34895579 ~ 34895913 (-)
LOC120567704 NA other upstream 1292857 35011108 ~ 35014245 (-)

Expression


Co-expression Network