LOC120568932


Basic Information

Item Value
gene id LOC120568932
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 30924766 ~ 30926283 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640809.1
gtggattacacTGCACTACCGGgactccgcggccagctgcaaGTACAAAAAGAGGCGCTCATGGCCAAGTTGCACGACTCATAGGTGGAGCCAGGACCACGAATCAGGCTGTCAACAAGTATCAGCAAGTTGTGTGAAGAAGAATGTCTGGCCCTTGCGGATGATGTAAATTACATGGGTTTTAAATACCTACCAATTCAAAAAATTGGCCAGGCTTGCCTGGAGGAGGACCAACATCTTGAGGCCATCGTCAAGGCCCAACACTGCAGTCAGACACTAACAAGGATAAAGACAACGATGGAGGCTAACTGGTCCTATTACAACTTCGCGAAGCATGGCCTTGGGCCAGAAATGTTGAAGGGtgctttttctttaattaatgCGTGCCTGGTCAAGGCAGAGAGCCTCCACTGCCTCCAGGAGTAaataaagcat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640809.1 True 435 lncRNA 0.49 3 30924766 30926283

Neighbor

gene id symbol gene type direction distance location
LOC120568730 LOC101472437,LOC102310659,LOC102778004,LOC103360659,LOC106534850 coding upstream 706044 30101634 ~ 30218722 (+)
LOC120569133 NA coding upstream 867657 30055815 ~ 30057109 (+)
LOC120569089 NA coding upstream 878576 30044894 ~ 30046190 (+)
LOC120568908 NA coding upstream 891232 30031910 ~ 30033534 (+)
LOC120567688 NA coding upstream 1181174 29735520 ~ 29743592 (+)
LOC120567691 LOC107740693 coding downstream 81439 31007722 ~ 31011324 (+)
LOC120568980 NA coding downstream 505523 31431806 ~ 31453460 (+)
eif3f eif3f coding downstream 934447 31860730 ~ 31865235 (+)
LOC120568893 LOC100705068 coding downstream 1002862 31929145 ~ 31939478 (+)
lig1 lig1,LOC102777267 coding downstream 1015920 31942203 ~ 32016352 (+)
G119076 NA non-coding upstream 28827 30850964 ~ 30895939 (+)
G119071 NA non-coding upstream 129263 30795242 ~ 30795503 (+)
G119066 NA non-coding upstream 231482 30692988 ~ 30693284 (+)
G119064 NA non-coding upstream 242445 30682081 ~ 30682321 (+)
G119030 NA non-coding upstream 461870 30452127 ~ 30462896 (+)
LOC120568931 NA non-coding downstream 157985 31084268 ~ 31085538 (+)
G119122 NA non-coding downstream 267848 31194131 ~ 31197339 (+)
LOC120568930 NA non-coding downstream 325503 31251786 ~ 31253673 (+)
G119219 NA non-coding downstream 427947 31354230 ~ 31354583 (+)
G119220 NA non-coding downstream 428414 31354697 ~ 31354972 (+)
LOC120568595 sdr16c5 other upstream 247414 30569095 ~ 30677352 (+)
LOC120567689 NA other upstream 954853 29963415 ~ 29969913 (+)
LOC120568082 LOC101159534,LOC103372818,LOC101069325 other upstream 2754796 28156801 ~ 28169970 (+)
LOC120568664 NA other upstream 3219555 27704001 ~ 27705211 (+)
LOC120568838 LOC103364371,LOC102207447,LOC101475014 other upstream 3315048 27602000 ~ 27609718 (+)
G119114 NA other downstream 238943 31165226 ~ 31203586 (+)
G119123 NA other downstream 272677 31198960 ~ 31235565 (+)
G119257 NA other downstream 533581 31459864 ~ 31460908 (+)
dnaaf6 pih1d3,LOC106903480,LOC103138000,LOC103138005,LOC103137996,LOC106960166 other downstream 939472 31865755 ~ 31869495 (+)
pip4p1a tmem55b,LOC101161334 other downstream 962625 31888908 ~ 31914704 (+)

Expression


Co-expression Network