LOC120568991


Basic Information

Item Value
gene id LOC120568991
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 23843831 ~ 23849958 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640816.1
TGATAAAGCTCCCCTTGTGCTCATGAAGATGATGACGGCACAAATCTGGGATGGCCTACTTTCCGAGGCGGCTCACAGATGACTAAACGAGAATCAGGATCTTTATTTTCCTTCAGAGAGGCTCCAAAAACGGATACCAATTTCAAAgacagattaagtcaggaaagtgggagagagactGGGATGACAAAGGGCCGTGGGTCGGAACCGAACCTCTGGCAGCTGcaacaaggactgagcctctggacatggggcgcacgctcaaccagttcATTGTCATCTACACAGCGTGACCCTCCAGAGGATAAAGACCACTGACTTTGGGGATTTCCTGACTTTTCCTGAAgagccaccatgaggttgacatttgtggcttTTGGGTGAAATGTCTCGACAACGAAGGGATGGATTGCTATGAAATTTGGTTCTGATATCCATGTCCCCTTCAGGATGAAGTGTAATAACCTAAGTGATCCCTTAGgtcggttacacactggctgcgtggcgtgagcgtggcgtttctgttgcgtgtcagctgcgtgtatttttctatgtctttacaca

Function

GO:

id name namespace
GO:0051536 iron-sulfur cluster binding molecular_function
GO:0051540 metal cluster binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640816.1 True 564 lncRNA 0.49 4 23843831 23849958

Neighbor

gene id symbol gene type direction distance location
LOC120568659 LOC104941252,LOC103479586,LOC107083372,LOC104918287,LOC103143038,LOC100704482,LOC107383950,LOC101069707,LOC103396165,LOC106929027,LOC101464457 coding downstream 57790 23736978 ~ 23786041 (-)
prtfdc1b LOC103364899,LOC104918289,LOC107083373 coding downstream 109447 23725487 ~ 23734384 (-)
arhgap21b NA coding downstream 119800 23682735 ~ 23724031 (-)
kmt2cb NA coding downstream 272468 23492963 ~ 23571363 (-)
LOC120568611 lama3 coding downstream 422054 23363029 ~ 23421777 (-)
kncn kncn coding upstream 11213 23861171 ~ 23865766 (-)
trnai-aau_23 NA coding upstream 17994 23867952 ~ 23868025 (-)
trnap-agg_8 NA coding upstream 19197 23869155 ~ 23869226 (-)
itm2cb itm2c,LOC103366712 coding upstream 55888 23905846 ~ 23912764 (-)
per2 LOC103366709 coding upstream 66783 23916741 ~ 23933804 (-)
G117324 NA non-coding downstream 236 23842246 ~ 23843595 (-)
G117311 LOC103366706,LOC100534445,LOC107383951 non-coding downstream 23865 23815891 ~ 23819966 (-)
G117302 NA non-coding downstream 57358 23786090 ~ 23786473 (-)
G117265 NA non-coding downstream 381535 23446358 ~ 23462296 (-)
G117206 LOC101469337 non-coding downstream 501908 23341354 ~ 23341923 (-)
G117337 NA non-coding upstream 36506 23886464 ~ 23888799 (-)
G117341 NA non-coding upstream 44201 23894159 ~ 23895101 (-)
G117342 NA non-coding upstream 45561 23895519 ~ 23895770 (-)
G117343 NA non-coding upstream 46017 23895975 ~ 23896911 (-)
G117369 NA non-coding upstream 84961 23934919 ~ 23938107 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other downstream 352219 23468620 ~ 23491612 (-)
G117259 vps4b other downstream 412839 23430366 ~ 23430992 (-)
LOC120569135 ttc39c,LOC102790819 other downstream 482251 23345718 ~ 23361580 (-)
G116969 NA other downstream 1575272 22261998 ~ 22268559 (-)
higd1a higd1a other downstream 2833255 21008048 ~ 21010576 (-)
LOC120568990 LOC101487892,LOC104941256 other upstream 1115 23851073 ~ 23856621 (-)
G117560 NA other upstream 649422 24499380 ~ 24536496 (-)
G117732 NA other upstream 1072245 24922203 ~ 24923318 (-)
camk2n1a camk2n2 other upstream 2465812 26315770 ~ 26319595 (-)
G118175 NA other upstream 2811663 26661621 ~ 26665952 (-)

Expression


Co-expression Network