LOC120569016


Basic Information

Item Value
gene id LOC120569016
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 33861438 ~ 33866996 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640825.1
gttacaatGAAAAAATCTATTCAGTAGCTTCGCTGCAAAACATCTTTAGCTAGTCCTGTTCTAATAACTTTTGTACAGCTGAAACGTTAGTTTTACAGGTGAACATCTAGCATCCCCAAAACGTTGCACAAAGACACTACAATAATGATTTCTGGCAATATGCGGAACTCACCCTCTCTGCCGgacagggacagacagagacggATTAGAACAAATAGTATACTACAAAGGATCTTTGGGACAGGTTTTCAGGACAACTGCATGGCAACGGGACGCTTCTGAAGAAacactgctctctgattggtccgcTGTGAAGCGTGCGAAAACCCAGCGAAACTCCGCGCGAGATCCAAAGGACTGGCGCGAGAAAGACAGGATCATGGAGCCAACACCGACCAAGACTATTATTATACACCTGCCTGGCACTGCTTAAAAACTAGCCCTCTGAGGTACAACGACACCTACCAGTACCCCCGGTGAGGCCGCAATATTTCTCGCTTTCTCTTCGGCCATCTCTACAGGATGTGGTTTCTCTACAGTCTGGCTGTAACTCCAGGAACCCTGAGACAGAGACTGAAAGTGATGACCACTCCAGAAGAGGACCTGTTCAGAGTACCAACCGAAGAAAACACTAAACCCTGAAACAAGTCCTTCCTAAAAAGAACATGAATGGTGTGCTTGAACATGACTATTTCAGACTTTAAAAATGGTCTGAAACATAACAGCATGTCgacattatacagtacaggccaaaagtttggacacaccttctcattcaatgcatttcctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640825.1 True 790 lncRNA 0.45 4 33861438 33866996

Neighbor

gene id symbol gene type direction distance location
wls wls coding upstream 51762 33768879 ~ 33809676 (+)
scinlb LOC106958286,LOC106904251,LOC103149535 coding upstream 93659 33743259 ~ 33767779 (+)
ccdc18 NA coding upstream 131798 33701632 ~ 33729640 (+)
mtf2 mtf2 coding upstream 162652 33682701 ~ 33698786 (+)
rpl5a LOC104920939,LOC100700425,LOC103149531,LOC106904255,LOC106958298,LOC107396374 coding upstream 199693 33657799 ~ 33661745 (+)
dmbx1a dmbx1,LOC102206215,LOC102778954,LOC100697381,LOC103354234 coding downstream 62071 33929067 ~ 33938778 (+)
ptger4c LOC104920997,LOC103353922,LOC100696844 coding downstream 137899 34004895 ~ 34007251 (+)
nr2f6a LOC104920957,LOC101167397,LOC106911939 coding downstream 376842 34243838 ~ 34253143 (+)
angptl4 LOC103369125 coding downstream 558303 34425299 ~ 34432504 (+)
mast3a LOC104920969,LOC103357775 coding downstream 663559 34530555 ~ 34565654 (+)
G119922 NA non-coding upstream 262781 33597873 ~ 33598657 (+)
G119901 NA non-coding upstream 299367 33538172 ~ 33562071 (+)
G119767 NA non-coding upstream 570858 33290330 ~ 33290580 (+)
G119763 NA non-coding upstream 592236 33268370 ~ 33269202 (+)
G119744 NA non-coding upstream 668239 33192587 ~ 33193199 (+)
LOC120569017 NA non-coding downstream 399 33867395 ~ 33870784 (+)
G119961 NA non-coding downstream 773 33867769 ~ 33868000 (+)
G119963 NA non-coding downstream 1390 33868386 ~ 33868686 (+)
G120058 pif1 non-coding downstream 108832 33975828 ~ 33976887 (+)
G120059 NA non-coding downstream 116001 33982997 ~ 33983403 (+)
G119957 gadd45a,LOC106598934,LOC106568974 other upstream 1591 33858542 ~ 33859847 (+)
gng12a gng12,LOC104920945,LOC104956611,LOC103354642 other upstream 9501 33810968 ~ 33851937 (+)
pkn2a pkn2 other upstream 346014 33477336 ~ 33515424 (+)
G119769 grk7,LOC106528614,LOC104920904 other upstream 553574 33304822 ~ 33307864 (+)
LOC120568463 NA other upstream 695338 33163916 ~ 33166100 (+)
LOC120568585 LOC108244495 other downstream 88170 33955166 ~ 33957504 (+)
mrpl34 NA other downstream 297084 34164080 ~ 34165852 (+)
LOC120568953 dda1,LOC105024194,LOC106568965,LOC104920954 other downstream 299980 34166976 ~ 34172309 (+)
G120200 NA other downstream 450152 34317148 ~ 34317766 (+)
rps28 NA other downstream 533752 34400748 ~ 34404001 (+)

Expression


Co-expression Network