LOC120569017


Basic Information

Item Value
gene id LOC120569017
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 33867395 ~ 33870784 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640826.1
tgcattgaatgaggtgtgtccaaacttttggcctgtactgtataatgcaAACTTGTTCTTCTTCTGACAGCTTGATGCCTTTGAGAGAGACTCTGTGTTTTACGCAACCTCTAGCAAGTACATGAACCAATCAAATTTAACATGGACCCACCGCTGGGAGAAAAATGGGACAAGGTGTGCAAGCTGAAAGCCTTAAGACTGTGTGACAACCGTGATAAATGCAGCCGGCACTGACACGGCTAcggaaaaagacaaaagataCCTTTGTCTTGTCACAATAATCCTAATCTGTTTGAAGATGGGGCCACAttagagagaacgagagagagagaggggtaggAATGATGCAGATTTGTGGTCAGCAATGATAAATGTTGCCACATCAGAAACAGAGCTCAGTATGATGTTTCTCTCTAATGGCCTGATTGCTCAATTAATTCTGCGGCCCGTTCTTTGCCGGCCCCCTTTAATGTGGAAACAGCTATATTTTCTCCCAGATTAGTATAGATACAGGCTGACAGTCTGCACTGCTCAAGGTATTTGGGAGGTATAATTCATTCATAATGCCACAATGTGCCCCATCTATCATCTCAGGTTTTTCATCCGCTAACTTGCCGCTTGCTCCCTACTCTCATTCCAAGCTCTTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640826.1 True 649 lncRNA 0.44 3 33867395 33870784

Neighbor

gene id symbol gene type direction distance location
wls wls coding upstream 57719 33768879 ~ 33809676 (+)
scinlb LOC106958286,LOC106904251,LOC103149535 coding upstream 99616 33743259 ~ 33767779 (+)
ccdc18 NA coding upstream 137755 33701632 ~ 33729640 (+)
mtf2 mtf2 coding upstream 168609 33682701 ~ 33698786 (+)
rpl5a LOC104920939,LOC100700425,LOC103149531,LOC106904255,LOC106958298,LOC107396374 coding upstream 205650 33657799 ~ 33661745 (+)
dmbx1a dmbx1,LOC102206215,LOC102778954,LOC100697381,LOC103354234 coding downstream 58283 33929067 ~ 33938778 (+)
ptger4c LOC104920997,LOC103353922,LOC100696844 coding downstream 134111 34004895 ~ 34007251 (+)
nr2f6a LOC104920957,LOC101167397,LOC106911939 coding downstream 373054 34243838 ~ 34253143 (+)
angptl4 LOC103369125 coding downstream 554515 34425299 ~ 34432504 (+)
mast3a LOC104920969,LOC103357775 coding downstream 659771 34530555 ~ 34565654 (+)
LOC120569016 NA non-coding upstream 399 33861438 ~ 33866996 (+)
G119922 NA non-coding upstream 268738 33597873 ~ 33598657 (+)
G119901 NA non-coding upstream 305324 33538172 ~ 33562071 (+)
G119767 NA non-coding upstream 576815 33290330 ~ 33290580 (+)
G119763 NA non-coding upstream 598193 33268370 ~ 33269202 (+)
G120058 pif1 non-coding downstream 105044 33975828 ~ 33976887 (+)
G120059 NA non-coding downstream 112213 33982997 ~ 33983403 (+)
G120062 NA non-coding downstream 116648 33987432 ~ 33987907 (+)
G120069 NA non-coding downstream 141894 34012678 ~ 34012883 (+)
G120064 NA non-coding downstream 171768 34042552 ~ 34111347 (+)
G119957 gadd45a,LOC106598934,LOC106568974 other upstream 7548 33858542 ~ 33859847 (+)
gng12a gng12,LOC104920945,LOC104956611,LOC103354642 other upstream 15458 33810968 ~ 33851937 (+)
pkn2a pkn2 other upstream 351971 33477336 ~ 33515424 (+)
G119769 grk7,LOC106528614,LOC104920904 other upstream 559531 33304822 ~ 33307864 (+)
LOC120568463 NA other upstream 701295 33163916 ~ 33166100 (+)
LOC120568585 LOC108244495 other downstream 84382 33955166 ~ 33957504 (+)
mrpl34 NA other downstream 293296 34164080 ~ 34165852 (+)
LOC120568953 dda1,LOC105024194,LOC106568965,LOC104920954 other downstream 296192 34166976 ~ 34172309 (+)
G120200 NA other downstream 446364 34317148 ~ 34317766 (+)
rps28 NA other downstream 529964 34400748 ~ 34404001 (+)

Expression


Co-expression Network