LOC120569030


Basic Information

Item Value
gene id LOC120569030
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 10840517 ~ 10843220 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640827.1
ctaaatataaGAGGGAAATGTATTGTAACTTATGTGTTAAGCCAGTTAAATTATCAcaatctctgttttttttttgtttttttttaaaggtcaacGCAGAGTTTCAACAAATCACCACCATAAATCTTGAGGCAAAATTCATGTCAATTTTGGACCTTCATTCCCCTAAACTCCTTTCCAGAGAGAAACATCGTGCAGAAATGAATATTTCCTACAGAGTGGAATTTCCATTCAGAAAACCATAGAAGTCATCCGATCAATCatcaatgatcaatcatcaatcACCTTGGTGAAGATGATCAAAGAGTTTGAGGTGATGGCTGTGTACCTGTTCCGGAATAAAAGTGGACAGGTCAATGATGTTGGGATCGTCATTGAAGGTTCCATTGTACTCAACCATCTTGGGGATCTTAGCAGATCCTGTTGCTTCCTGCTAGCACTGACCCTATGCTTTGGATCTGAAATATCCCAAAActcatgaatacatttttgagTTTGCTTGTGGAAGTGGATTCCGGAAACCTTTCAGCAAAGGTGCAAAGACTGAAACAATGTGGTCATATAGGTTGCTGAGAGGCAGCTGTTCAgatgagaaaatatgttttatttaatcaGACAATCTCCAGGTGTGGTCAGGCTCAAAGTGTTGGACAGATTTCAATTCTTATAACAAGAATGAATTTATTACGCTTTATTTTTCCATGTCTTTGGGTgtaaacacatttacaacatAAGTTCCTTATGACTGGGCCATTTAGTTGTTTATTCCTTTTAAAACATTGCTCTGGGTTGTCCTTTTATATTCGAAGTAGATGTGTATAAAATCAGTGTCTCACCCTGCCTGCAGACTGTAATGTGTTGTGTAAATGTAGAATGCTAAAAGATGACTACAGTATTTTTTGAGTGTAAATGATTGATACCCGATGGCCGGAGTCAAGTTTTTGCATCTAACAGGTTCAGATTGTTATAAGTGTCTAGCGACATTGTGAATAGGATACCTTATGCACTTCTCACTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640827.1 True 1018 lncRNA 0.37 3 10840517 10843220

Neighbor

gene id symbol gene type direction distance location
klhl20 klhl20,LOC106569069 coding upstream 999739 9826159 ~ 9840778 (+)
LOC120567595 LOC104937197,LOC103364125,LOC101484549,LOC100690053 coding upstream 1016812 9816589 ~ 9823705 (+)
LOC120567812 NA coding upstream 1175916 9650411 ~ 9664601 (+)
LOC120567813 LOC101470061 coding upstream 1201438 9626164 ~ 9639079 (+)
LOC120567805 LOC101483728 coding upstream 1239459 9586693 ~ 9601058 (+)
cop1 rfwd2 coding downstream 24822 10868042 ~ 10881652 (+)
xrn1 xrn1 coding downstream 49157 10892377 ~ 10917505 (+)
LOC120567859 NA coding downstream 234012 11077232 ~ 11078874 (+)
LOC120567857 LOC103355151,LOC102312891,LOC104961060,LOC101474626 coding downstream 240643 11083863 ~ 11095487 (+)
LOC120567862 LOC104961053,LOC103355148,LOC107384202 coding downstream 253557 11096777 ~ 11100216 (+)
LOC120569032 NA non-coding upstream 1414 10837503 ~ 10839103 (+)
G113446 NA non-coding upstream 997034 9842701 ~ 9843483 (+)
G113429 NA non-coding upstream 1026275 9811980 ~ 9814242 (+)
G113338 LOC106931405,LOC106965048,LOC102781692,LOC103146972 non-coding upstream 1137867 9690488 ~ 9702650 (+)
G113337 LOC103364124 non-coding upstream 1156779 9673705 ~ 9683738 (+)
G113492 NA non-coding downstream 43772 10886992 ~ 10887667 (+)
G113498 LOC104957117 non-coding downstream 83236 10926456 ~ 10928243 (+)
LOC120567863 NA non-coding downstream 203336 11046556 ~ 11055806 (+)
G113619 NA non-coding downstream 676080 11519300 ~ 11524768 (+)
G113620 NA non-coding downstream 681758 11524978 ~ 11525250 (+)
G113130 NA other upstream 1837949 8944477 ~ 9002568 (+)
pdca LOC103370803,LOC104933924,LOC101478313,LOC102200750,LOC100699795,LOC102301525 other upstream 1937670 8895927 ~ 8902847 (+)
LOC120568881 mfsd12,LOC104931866 other upstream 2014706 8812897 ~ 8825811 (+)
LOC120568415 LOC103370799,LOC104931865,LOC101476899,LOC102794599,LOC102300092 other upstream 2031058 8789209 ~ 8809459 (+)
atg10 atg10 other upstream 2125246 8708661 ~ 8715271 (+)
LOC120568835 NA other downstream 42375 10885595 ~ 10886478 (+)
pkia pkia,LOC102780447,LOC102205080 other downstream 489348 11332568 ~ 11346225 (+)
abhd4 abhd4 other downstream 1279449 12122669 ~ 12128022 (+)
LOC120568189 nop9 other downstream 1314229 12157449 ~ 12166277 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other downstream 1739422 12582642 ~ 12599840 (+)

Expression


Co-expression Network