LOC120569033


Basic Information

Item Value
gene id LOC120569033
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 10410527 ~ 10411330 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640830.1
ctgtATTCTTCAATCTCCTTTCTTATAGTACAACTCCTACACTATCACAGCCTAGGCAGGCAGAGGTGAACACGAGTGAAAAACTGGTGATGCCAGTGCTTACATGTCACTCAAGAGGATCTAGGTCAAGGGGCGTGGCCACTCTCACCTGCTCTGCTCCAGCCAGCTGCAGATCATTCCAGTAATCAACCACCAGTTATCAACCCGGGCTGTTCACCTCTTCGGCGCCAGTTCGTTGCAACCATTCTTGTGATTCTGCCTCTGGACCTGCTGCTCACCAGCTTTCATCTGCCTCCTCGCTGCCTGCTCACCTCGCCGCTCCACTCTCAACCAGCCATTCCACCCAGCTGTCATCTTCGCTGCCTGGCCACACACCCTCCTTCTGATCTCCGGCTTCGACCCTACCTGGAGCTGCTATCCTGGCCACCTCCCTCCTCCACTATCAAACGACGTTTCTAATAAACACTGTAATCAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640830.1 True 477 lncRNA 0.53 3 10410527 10411330

Neighbor

gene id symbol gene type direction distance location
map4l LOC103364124,LOC102200499,LOC102297845,LOC108238623,LOC107384193,LOC102781692,LOC104942656 coding downstream 622307 9674884 ~ 9788220 (-)
fitm1l LOC103375111,LOC104934817,LOC102294302,LOC101483423 coding downstream 846786 9551992 ~ 9563741 (-)
ankrd45 NA coding downstream 872965 9534265 ~ 9537562 (-)
cryz cryz coding downstream 1051994 9352318 ~ 9358533 (-)
lrrc53 NA coding downstream 1058363 9343577 ~ 9352164 (-)
pappa2 pappa2 coding upstream 344566 10755896 ~ 10861608 (-)
col15a1b NA coding upstream 511238 10922568 ~ 10996589 (-)
LOC120568748 LOC103355153,LOC104929170 coding upstream 595549 11006879 ~ 11043741 (-)
LOC120567858 LOC103355152 coding upstream 644508 11055838 ~ 11094619 (-)
ctnnd2b ctnnd2,LOC101475998,LOC102313221,LOC100711149,LOC102780722 coding upstream 740097 11151427 ~ 11321003 (-)
LOC120569031 NA non-coding downstream 31726 10372699 ~ 10378801 (-)
G113457 NA non-coding downstream 370642 10039657 ~ 10039885 (-)
LOC120567726 NA non-coding downstream 496861 9906924 ~ 9913666 (-)
G113438 NA non-coding downstream 586770 9822437 ~ 9823757 (-)
G113426 NA non-coding downstream 737855 9672452 ~ 9672672 (-)
G113553 xrn1,LOC103355159 non-coding upstream 500170 10911500 ~ 10912177 (-)
G113627 NA non-coding upstream 707672 11119002 ~ 11123476 (-)
LOC120568658 NA non-coding upstream 913276 11324606 ~ 11329834 (-)
G113653 NA non-coding upstream 946404 11357734 ~ 11403230 (-)
G113656 NA non-coding upstream 954041 11365371 ~ 11367604 (-)
brinp2 brinp2,LOC103369811 other downstream 143449 10040686 ~ 10267078 (-)
LOC120568397 NA other downstream 900030 9400787 ~ 9510497 (-)
chd7 chd7,LOC103370133,LOC102782711 other downstream 1215655 9114384 ~ 9194872 (-)
G113070 NA other downstream 1620485 8780452 ~ 8790042 (-)
trnak-uuu_16 NA other downstream 1922988 8487467 ~ 8487539 (-)
LOC120567758 NA other upstream 475677 10887007 ~ 10888952 (-)
G113805 NA other upstream 1806732 12218062 ~ 12218267 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other upstream 2189850 12601180 ~ 12608569 (-)
LOC120568934 LOC104956577 other upstream 2349418 12760748 ~ 12768625 (-)
LOC120568578 wdr48 other upstream 2555136 12966466 ~ 12975328 (-)

Expression


Co-expression Network