LOC120569046


Basic Information

Item Value
gene id LOC120569046
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 16823302 ~ 16824660 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640831.1
ATCTATTTGTTGTGGTCCATGAAGCTGCATAGGTGGGACTATCTGCTTCTTGCTCCAGCGAGGTCCTTGGTTGCCTATTCATCAGCCTTTGATACTGTGGAAATGAAAACAAGGTCACCAGTGGGAAACGGCTACCTGCTGGGAGCAAGTGTTCACCTGCTGCTCTCCACTCCCACCCTCCTCACTGTGCTCCACGTGATGTCAAAGATGCATGGCTGCCGAACATAGAAACAGATGAACCAGAATTGCCTATATGTCTCCTTGACCTGTATCGGTCGCTACGCTGTCACGCATCTTATTAGCCACAACCAGAAGCTGCAGATGGACCCTAATGGTCATTCATCAAAAGGCGCTCTCCTTCCTACAGTACCTGAGCAGATGATGGTGCAGATGATGGTTAAGGTGGGAAGCTCTGGTGTGATTTATGAGAAAGTCCTCCAGTTTGAGTTGGCATTGTGCATAATATTGAGCATGGTAGAGCTTCAGTCCAAAACTGAAGGTCAACAGATTGCTGTAAGTGTGTTTCATTATTAATAACAGCATTTTGGTTTGGTGAAGAATACTTTATTTACAGTTATTTTGTCTTGACCCTATTTTGTGCGCTGATAGGATCTGTTTTGACAATGTTGGAGTTTGATAGTGTGATCCTCTGGGGAATTGTAACAGATAATCCAGGTTATAAAATACATCAGGTATAACAAATGGGTTGTATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640831.1 True 714 lncRNA 0.44 3 16823302 16824660

Neighbor

gene id symbol gene type direction distance location
LOC120567917 tmem200c,LOC104967041 coding downstream 3268 16814692 ~ 16820034 (-)
LOC120568957 LOC103353943 coding downstream 68536 16751993 ~ 16754766 (-)
LOC120568912 apcdd1,LOC102777074 coding downstream 111038 16685480 ~ 16712264 (-)
acss2l LOC100697261 coding downstream 261139 16541130 ~ 16562163 (-)
napgb napg,LOC102781071 coding downstream 387061 16430142 ~ 16436241 (-)
LOC120568369 ptprm,LOC102799796 coding upstream 23150 16847810 ~ 17015626 (-)
LOC120567671 lrrc30,LOC104932041,LOC103353948 coding upstream 196075 17020735 ~ 17022393 (-)
LOC120569119 LOC101466820,LOC102797643,LOC103353954,LOC100700019 coding upstream 341231 17165891 ~ 17176411 (-)
LOC120568842 LOC103353955,LOC104931259 coding upstream 358502 17183162 ~ 17275789 (-)
LOC120567855 NA coding upstream 472395 17297055 ~ 17298924 (-)
G115331 NA non-coding downstream 72027 16750900 ~ 16751275 (-)
G115323 NA non-coding downstream 208377 16613028 ~ 16614925 (-)
G115309 NA non-coding downstream 262829 16543613 ~ 16560473 (-)
G115278 mtcl1 non-coding downstream 310407 16508577 ~ 16512895 (-)
G115240 NA non-coding downstream 506330 16316651 ~ 16316972 (-)
G115391 NA non-coding upstream 212206 17036866 ~ 17039107 (-)
G115428 LOC103353952,LOC107089435 non-coding upstream 288056 17112716 ~ 17114744 (-)
G115429 NA non-coding upstream 295261 17119921 ~ 17121046 (-)
G115430 LOC102789304,LOC101466350,LOC102216210,LOC102305671,LOC100690840 non-coding upstream 298062 17122722 ~ 17123058 (-)
G115433 abca4,LOC108232920,LOC100690840,LOC102789304,LOC102216210,LOC101466350 non-coding upstream 309213 17133873 ~ 17135813 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other downstream 11384 16756331 ~ 16811918 (-)
G115312 ralbp1,LOC102778314 other downstream 183490 16637108 ~ 16639812 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other downstream 487346 16330952 ~ 16335956 (-)
mppe1 mppe1,LOC102781954 other downstream 495876 16317418 ~ 16327426 (-)
cc2d1b cc2d1b other downstream 621604 16182654 ~ 16201698 (-)
ly97.3 NA other upstream 215140 17039800 ~ 17108904 (-)
G115406 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 other upstream 218466 17043126 ~ 17045062 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other upstream 1228324 18052984 ~ 18058159 (-)
sppl2 sppl2b other upstream 1656010 18480670 ~ 18494488 (-)
LOC120568909 LOC103353029,LOC104955147,LOC101484702,LOC102780695 other upstream 1878404 18703064 ~ 18720587 (-)

Expression


Co-expression Network