XLOC_004741 (mmrn2b)


Basic Information

Item Value
gene id XLOC_004741
gene name mmrn2b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 25945560 ~ 25948479 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00009387
ATGACAGAGAAGGGATCTCCACCTCTAAGCCCCTGCCAATCTTTGATTCATCCATTCTGCTGACAATGCATCAGTTAATGTCAACAATGATGAGTCAGATTCAACCAGTGCTGGAAAGCTTCAATCAAACACTAGAGCATCTGTCCAGTGAGGTCAACACTCTGTCTCGGGACTTGCAGCAGTTGCGGATGGAAAAGGAAGACAACAGGTTCATCAGCAAGGGTGAAGGTCATAGTGGACCTTTTGAAGACAGACTAGAATACAACCATCTCCAAATCAGCCAAATAAAAACTCAACTTAAGGCACAGAAAGATCAGATAGAGAGGACCTTTCAGACTCAACAAGAACTGCTGAAACACAACCTAACGAAAATGAAGGAAGAGTTGGATGAGCAGATCAGTCAAAGTCAGGAATCACAGGTCAGTAAATCACTTAAATTCTTTAAATGACTACTCAAAGTCCTAACACAGACATTTTTCGACTCTTTATTTTCCTGTAGAGATCAATTGCAACCTTGATCTAACTCCTAACTTTTTTCTAGTAATCCTGTTTAGTTAGGGTTCGAGCTAACTCTGCATGAATGACGATCTCAATGGCCTGGGTTGAGAACCCTTGTTCTAAACACATGAAAAGGTGTGCATAACTCATGATTTATGTTACACCAACAGATCAATCTTCAATCTCTTACTGATTTGGTTGTGGAAGTGAGATCTGGCCAAAAAAAGCTGGAAGGGGCACTGCAGAGAGAGCGTGATAAATTTGTCAATCTGATGGAAGGCCAGCCAACACAGGCATCAGGAGCGTGGGAGGCCATCACTCGAATAGATGAGAAGGCACAAAGTAACTCTGTTCAGCTCAGCAGCTTGTCAGAGGCTTTGAAAGACTCTTCTAGAGTCGTCCAGGATCTGAAAAGAGACCAAGTGAAACTAGGAAATAGTTTAGAGGAGGTCAAACAACGCACTCAAGTCCATTTTGCGGAGACAGGTTTGGAATTAGAAGCTACCCACATCAAGGTGGTCAATAGCCTAGGTGAGCTTACAGCTAACGTAAGTGCACATGAGGGTCAGTTAAGAGAAATTGAGCTTGATCTGGTGAACATCTACAATCTACTACAAAGAAATGATTCAGTCACTGCTGAGCAGACCTGTAGCTGTAAAGTAATAACCAGTTCCCTTGTTAGGTTGGAGAAGGAGGTGGATAATGTTACCCAACTAGCGAGACAGAATAGTCTTGCACTTGAGGAGGCTGATTTAGAAAGGAATGAGGCTACTGAAATGGAAGATCTTCAGCACGGCCTGCTGAATATGAAGGAATCATTGGCCTTTGAGCAGGGAAGAAGCAGGAGCCTTCAAGACAGCATTTTACAGCTACAGGATTCATTTCTGGACAGCAAGCTTGAGATTCAAGGCCTGAGAGAGCAAGACAGGGAACAGTCCGCTGAAATTCAAGGCCTATCTGCCGCCTTCTCTTCCCTCCTGAATGATGCTGTACGCCACTCTGAAGTCCTGGAAGTCCTACTTGGAGAAGAAGTCTTGGAATTCACACACTGGTCGCAAAGCCGACAGAAAGAGCTCAGTCTTCCAGATCTTTTACAGACAATTCAAATGATGCAGCAAAAGATTGAAACACATGATCGGAGCCTGACTTCACTTCGGAGAAAGCATCCTGATGGAGATGAGATGAATAGTGATGATCCAGTTCCATATTCAGAAAGGCCTGGGATGAAACAACAGATGAAAGACACAGAAGGTTACCAAACCTCTTCAGCAGACCCTTCGAATGCAGAGGATGACGTGGATTACTCTGTTAGTGACTTCTGGAGTTTGGGAAAAGAGGTGGAACAATTAGCAAATAGAATATCCATGTTGGAAGAGCGCTGTGGAAACAGCACTGAGCCACCTGGTGGATCTGTTTTGGAATTGCAGGAAGAAATAGCATCCTTACGCCAAAGCCTAGAGGATCATTTGAAACTTTTTGGAAAACTGTTCAGTAAAACAGAAGAACTAGCCAGCTCAACTAGAAGCCTGAACCTAGATGAGGTTTGGAGGATGGTAAGAAGAAAAGAAGGAAAGAGAAGAAGGGGGGACCAAAAGCAAGCAGACCAGATGAGAAATGAAGAAAGGAATTCCAGTGGACGAGGCAAAAGATACAGCCAAACAGAACAAGCATGGTTCCCACAATCCCCAGTGGTGTTCGTCACAAACCTGGATGACATAAAGAAGCCAAATGCGGAACTCACATCTAAAAACATTCTTCTGAACTATGGTGGTATGTTTAAACCTACATCAGGAGTGTTCCAGGCCCCTGAGACAGGACTTTATCTCTTTTTAGTGACCTTAGACTTTGAGAGAGGCCTTTCATTGGCTGTACTGAACCGCAGTGGCGTTCCAATAGCCACCTTCAAACAGGAACATGGAGAAAAAATGGGGCCGGTGAGCCGAGCATCTCTGCTGGAGCTGCGGCGGGGGGAGACGGTTACTTTAGAATTGACGCACGGATCATTACGAAAAGCACAGCCTGGGGACAACACACTGTCTGGACTACTGCTCTTCATTACAGAGCACAAGGACATGTTGTGA

Function

symbol description
mmrn2b Is expressed in several structures, including ependymal cell; otic vesicle; pectoral fin; primitive heart tube; and tail bud. Orthologous to human MMRN2 (multimerin 2).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-080415-2 Is expressed in several structures, including ependymal cell; otic vesicle; pectoral fin; primitive heart tube; and tail bud. Orthologous to human MMRN2 (multimerin 2).

Ensembl:

ensembl_id ENSDARG00000073711

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00009387 True 2579 mRNA 0.44 2 25945560 25948479

Neighbor

gene id symbol gene type direction distance location
XLOC_004740 glud1b coding upstream 63616 25845494 ~ 25881944 (+)
XLOC_004739 epas1a coding upstream 115292 25775734 ~ 25830268 (+)
XLOC_004737 prkcea coding upstream 175328 25640480 ~ 25770232 (+)
XLOC_004738 CR932018.1 coding upstream 297317 25648127 ~ 25648243 (+)
XLOC_004736 six3b coding upstream 342219 25600685 ~ 25603341 (+)
XLOC_004742 itgb3b coding downstream 485999 26434478 ~ 26461744 (+)
XLOC_004743 ndel1a coding downstream 519368 26467847 ~ 26487363 (+)
XLOC_004744 NA coding downstream 540874 26489353 ~ 26491973 (+)
XLOC_004745 armc7 coding downstream 543158 26491637 ~ 26494851 (+)
XLOC_004746 chad coding downstream 564090 26512569 ~ 26525699 (+)
XLOC_004735 NA non-coding upstream 441180 25502406 ~ 25504380 (+)
XLOC_004733 CR932077.1 non-coding upstream 515189 25312018 ~ 25430371 (+)
XLOC_004731 CR848736.1 non-coding upstream 730833 25201543 ~ 25214727 (+)
XLOC_004728 CR385067.1 non-coding upstream 870440 25073305 ~ 25075120 (+)
XLOC_004748 NA non-coding downstream 641165 26589644 ~ 26593298 (+)
XLOC_004751 NA non-coding downstream 743340 26691819 ~ 26692051 (+)
XLOC_004752 NA non-coding downstream 788952 26737431 ~ 26834192 (+)
XLOC_004754 BX469896.1 non-coding downstream 945842 26894321 ~ 26896616 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000063_05639341_05650366 NA coding CI01000063 null 5639290 ~ 5650682 (+)