trnas-cga_5



Basic Information


Item Value
gene id trnas-cga_5
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 6219305 ~ 6219386 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>unassigned_transcript_529
GCTGTGATGGCTGAGAGGTTAAGGGGTTGGACTCGAAATCCAATGGGGTTTCCCCTCGTAGGTTCAAACCCTACTCACAGCG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_529 True 82 tRNA 0.54 1 6219305 6219386

Neighbor


gene id symbol gene type direction distance location
trnas-uga_15 NA coding downstream 493 6218731 ~ 6218812 (-)
trnas-uga_14 NA coding downstream 1050 6218174 ~ 6218255 (-)
trnas-uga_13 NA coding downstream 1622 6217602 ~ 6217683 (-)
trnas-uga_12 NA coding downstream 2193 6217031 ~ 6217112 (-)
trnas-uga_11 NA coding downstream 2765 6216459 ~ 6216540 (-)
trnas-uga_16 NA coding upstream 487 6219873 ~ 6219954 (-)
trnas-uga_17 NA coding upstream 1067 6220453 ~ 6220534 (-)
trnas-uga_18 NA coding upstream 1630 6221016 ~ 6221097 (-)
trnas-uga_19 NA coding upstream 7279 6226665 ~ 6226746 (-)
trnas-uga_20 NA coding upstream 8317 6227703 ~ 6227784 (-)
G112381 NA non-coding downstream 103161 6113462 ~ 6116144 (-)
G112383 NA non-coding downstream 113488 6082641 ~ 6105817 (-)
G112352 NA non-coding downstream 225532 5922747 ~ 5993773 (-)
G112332 NA non-coding downstream 427542 5774413 ~ 5791763 (-)
G112253 NA non-coding downstream 497335 5720657 ~ 5721970 (-)
G112453 NA non-coding upstream 127949 6347335 ~ 6347853 (-)
G112460 NA non-coding upstream 137412 6356798 ~ 6357990 (-)
G112461 NA non-coding upstream 138693 6358079 ~ 6359329 (-)
G112462 NA non-coding upstream 140086 6359472 ~ 6359952 (-)
LOC120568643 NA non-coding upstream 168708 6388094 ~ 6392982 (-)
LOC120567959 NA other downstream 40419 6172281 ~ 6178886 (-)
G112328 NA other downstream 366858 5793163 ~ 5852447 (-)
LOC120568546 NA other downstream 473224 5723733 ~ 5746081 (-)
G112233 NA other downstream 550618 5664004 ~ 5668687 (-)
G112046 NA other downstream 1935222 4267538 ~ 4284083 (-)
zmynd11 zmynd11 other upstream 476224 6695610 ~ 6736512 (-)
si:ch211-267e7.3 LOC103370300 other upstream 737054 6956440 ~ 6990122 (-)
cdh6 LOC103366829,LOC104926815 other upstream 857223 7076609 ~ 7163670 (-)
trnak-uuu_16 NA other upstream 2268081 8487467 ~ 8487539 (-)
G113070 NA other upstream 2561066 8780452 ~ 8790042 (-)

Expression



Co-expression Network