trnas-uga_16



Basic Information


Item Value
gene id trnas-uga_16
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 6219873 ~ 6219954 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>unassigned_transcript_530
GCTGTGATGGCCGAGAGGTTAAGGTGTTGGCCTTGAAATCCAATGGGGTTTCCCCTCGTAGGTTCAAACCCTACTTACAGCG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_530 True 82 tRNA 0.52 1 6219873 6219954

Neighbor


gene id symbol gene type direction distance location
trnas-cga_5 NA coding downstream 487 6219305 ~ 6219386 (-)
trnas-uga_15 NA coding downstream 1061 6218731 ~ 6218812 (-)
trnas-uga_14 NA coding downstream 1618 6218174 ~ 6218255 (-)
trnas-uga_13 NA coding downstream 2190 6217602 ~ 6217683 (-)
trnas-uga_12 NA coding downstream 2761 6217031 ~ 6217112 (-)
trnas-uga_17 NA coding upstream 499 6220453 ~ 6220534 (-)
trnas-uga_18 NA coding upstream 1062 6221016 ~ 6221097 (-)
trnas-uga_19 NA coding upstream 6711 6226665 ~ 6226746 (-)
trnas-uga_20 NA coding upstream 7749 6227703 ~ 6227784 (-)
LOC120569024 wdr37,LOC102795438 coding upstream 36346 6256300 ~ 6283498 (-)
G112381 NA non-coding downstream 103729 6113462 ~ 6116144 (-)
G112383 NA non-coding downstream 114056 6082641 ~ 6105817 (-)
G112352 NA non-coding downstream 226100 5922747 ~ 5993773 (-)
G112332 NA non-coding downstream 428110 5774413 ~ 5791763 (-)
G112253 NA non-coding downstream 497903 5720657 ~ 5721970 (-)
G112453 NA non-coding upstream 127381 6347335 ~ 6347853 (-)
G112460 NA non-coding upstream 136844 6356798 ~ 6357990 (-)
G112461 NA non-coding upstream 138125 6358079 ~ 6359329 (-)
G112462 NA non-coding upstream 139518 6359472 ~ 6359952 (-)
LOC120568643 NA non-coding upstream 168140 6388094 ~ 6392982 (-)
LOC120567959 NA other downstream 40987 6172281 ~ 6178886 (-)
G112328 NA other downstream 367426 5793163 ~ 5852447 (-)
LOC120568546 NA other downstream 473792 5723733 ~ 5746081 (-)
G112233 NA other downstream 551186 5664004 ~ 5668687 (-)
G112046 NA other downstream 1935790 4267538 ~ 4284083 (-)
zmynd11 zmynd11 other upstream 475656 6695610 ~ 6736512 (-)
si:ch211-267e7.3 LOC103370300 other upstream 736486 6956440 ~ 6990122 (-)
cdh6 LOC103366829,LOC104926815 other upstream 856655 7076609 ~ 7163670 (-)
trnak-uuu_16 NA other upstream 2267513 8487467 ~ 8487539 (-)
G113070 NA other upstream 2560498 8780452 ~ 8790042 (-)

Expression



Co-expression Network