trnaq-cug_10


Basic Information

Item Value
gene id trnaq-cug_10
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 9539880 ~ 9539951 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_553
GGTTCCATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCAGCGATCCGAGTTCAAATCTCGGTGGGACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_553 True 72 tRNA 0.51 1 9539880 9539951

Neighbor

gene id symbol gene type direction distance location
trnaq-cug_9 NA coding upstream 678 9539131 ~ 9539202 (+)
trnaq-cug_8 NA coding upstream 1133 9538676 ~ 9538747 (+)
trnaq-cug_7 NA coding upstream 1729 9538080 ~ 9538151 (+)
bpnt2 impad1 coding upstream 5845 9523170 ~ 9534035 (+)
dars2 dars2 coding upstream 18038 9511182 ~ 9521842 (+)
trnaq-cug_11 NA coding downstream 1190 9541141 ~ 9541212 (+)
trnaq-cug_12 NA coding downstream 2108 9542059 ~ 9542130 (+)
trnau1apb LOC102780921,LOC102294605 coding downstream 2691 9542642 ~ 9551821 (+)
LOC120567806 LOC102294892,LOC101484004,LOC107384188,LOC102200768 coding downstream 26789 9566740 ~ 9581212 (+)
LOC120567805 LOC101483728 coding downstream 46742 9586693 ~ 9601058 (+)
G113306 NA non-coding upstream 69783 9469492 ~ 9470097 (+)
LOC120568401 NA non-coding upstream 70560 9467298 ~ 9469320 (+)
G113290 NA non-coding upstream 164775 9374449 ~ 9375105 (+)
G113274 NA non-coding upstream 270333 9269347 ~ 9269547 (+)
G113273 NA non-coding upstream 282297 9257323 ~ 9257583 (+)
G113337 LOC103364124 non-coding downstream 133754 9673705 ~ 9683738 (+)
G113338 LOC106931405,LOC106965048,LOC102781692,LOC103146972 non-coding downstream 150537 9690488 ~ 9702650 (+)
G113429 NA non-coding downstream 272029 9811980 ~ 9814242 (+)
G113446 NA non-coding downstream 302750 9842701 ~ 9843483 (+)
LOC120569032 NA non-coding downstream 1297552 10837503 ~ 10839103 (+)
G113130 NA other upstream 537312 8944477 ~ 9002568 (+)
pdca LOC103370803,LOC104933924,LOC101478313,LOC102200750,LOC100699795,LOC102301525 other upstream 637033 8895927 ~ 8902847 (+)
LOC120568881 mfsd12,LOC104931866 other upstream 714069 8812897 ~ 8825811 (+)
LOC120568415 LOC103370799,LOC104931865,LOC101476899,LOC102794599,LOC102300092 other upstream 730421 8789209 ~ 8809459 (+)
atg10 atg10 other upstream 824609 8708661 ~ 8715271 (+)
LOC120568835 NA other downstream 1345644 10885595 ~ 10886478 (+)
pkia pkia,LOC102780447,LOC102205080 other downstream 1792617 11332568 ~ 11346225 (+)
abhd4 abhd4 other downstream 2582718 12122669 ~ 12128022 (+)
LOC120568189 nop9 other downstream 2617498 12157449 ~ 12166277 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other downstream 3042691 12582642 ~ 12599840 (+)

Expression


Co-expression Network