trnap-agg_8


Basic Information

Item Value
gene id trnap-agg_8
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 23869155 ~ 23869226 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_562
ggctcgttggtctaggggtatgattctcgcttAGGGTGCGAGAGgtcccgggttcaaatcccggACGAGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_562 True 72 tRNA 0.61 1 23869155 23869226

Neighbor

gene id symbol gene type direction distance location
trnai-aau_23 NA coding downstream 1130 23867952 ~ 23868025 (-)
kncn kncn coding downstream 3389 23861171 ~ 23865766 (-)
LOC120568659 LOC104941252,LOC103479586,LOC107083372,LOC104918287,LOC103143038,LOC100704482,LOC107383950,LOC101069707,LOC103396165,LOC106929027,LOC101464457 coding downstream 83114 23736978 ~ 23786041 (-)
prtfdc1b LOC103364899,LOC104918289,LOC107083373 coding downstream 134771 23725487 ~ 23734384 (-)
arhgap21b NA coding downstream 145124 23682735 ~ 23724031 (-)
itm2cb itm2c,LOC103366712 coding upstream 36620 23905846 ~ 23912764 (-)
per2 LOC103366709 coding upstream 47515 23916741 ~ 23933804 (-)
LOC120567986 LOC104965059,LOC103366714 coding upstream 79477 23948703 ~ 23959073 (-)
thpo NA coding upstream 90851 23960077 ~ 23963327 (-)
LOC120567987 LOC104918277 coding upstream 112454 23981680 ~ 23983971 (-)
LOC120568991 NA non-coding downstream 19197 23843831 ~ 23849958 (-)
G117324 NA non-coding downstream 25560 23842246 ~ 23843595 (-)
G117311 LOC103366706,LOC100534445,LOC107383951 non-coding downstream 49189 23815891 ~ 23819966 (-)
G117302 NA non-coding downstream 82682 23786090 ~ 23786473 (-)
G117265 NA non-coding downstream 406859 23446358 ~ 23462296 (-)
G117337 NA non-coding upstream 17238 23886464 ~ 23888799 (-)
G117341 NA non-coding upstream 24933 23894159 ~ 23895101 (-)
G117342 NA non-coding upstream 26293 23895519 ~ 23895770 (-)
G117343 NA non-coding upstream 26749 23895975 ~ 23896911 (-)
G117369 NA non-coding upstream 65693 23934919 ~ 23938107 (-)
LOC120568990 LOC101487892,LOC104941256 other downstream 12534 23851073 ~ 23856621 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other downstream 377543 23468620 ~ 23491612 (-)
G117259 vps4b other downstream 438163 23430366 ~ 23430992 (-)
LOC120569135 ttc39c,LOC102790819 other downstream 507575 23345718 ~ 23361580 (-)
G116969 NA other downstream 1600596 22261998 ~ 22268559 (-)
G117560 NA other upstream 630154 24499380 ~ 24536496 (-)
G117732 NA other upstream 1052977 24922203 ~ 24923318 (-)
camk2n1a camk2n2 other upstream 2446544 26315770 ~ 26319595 (-)
G118175 NA other upstream 2792395 26661621 ~ 26665952 (-)
cirbpa cirbp other upstream 2950612 26819838 ~ 26824570 (-)

Expression


Co-expression Network