trnam-cau_25


Basic Information

Item Value
gene id trnam-cau_25
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 34772150 ~ 34772221 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_568
AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATAGATCGAAACTATCCTCTGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_568 True 72 tRNA 0.57 1 34772150 34772221

Neighbor

gene id symbol gene type direction distance location
trnar-ccu_3 NA coding upstream 4 34772074 ~ 34772146 (+)
LOC120568807 LOC100693392,LOC103352799,LOC101161005,LOC103131440 coding upstream 5819 34743728 ~ 34766331 (+)
LOC120568804 LOC101486461 coding upstream 29140 34721550 ~ 34743010 (+)
pgpep1 pgpep1,LOC103361119 coding upstream 52280 34714976 ~ 34719870 (+)
LOC120568198 LOC104920972,LOC103369709,LOC102237980,LOC108244847,LOC102193504 coding upstream 64177 34692627 ~ 34707973 (+)
trnam-cau_26 NA coding downstream 3857 34776078 ~ 34776149 (+)
LOC120568812 LOC102310619,LOC100692846,LOC108280567,LOC105903927,LOC106524909,LOC108427173 coding downstream 37671 34809892 ~ 34824821 (+)
LOC120569116 LOC107667722 coding downstream 393437 35165658 ~ 35168716 (+)
LOC120567912 NA coding downstream 489337 35261558 ~ 35262902 (+)
LOC120567707 LOC106910133,LOC107834262,LOC106939220,LOC107373952,LOC104944801 coding downstream 659458 35431679 ~ 35443813 (+)
LOC120568809 NA non-coding upstream 473 34768101 ~ 34771677 (+)
G120295 NA non-coding upstream 153938 34617774 ~ 34618212 (+)
G120291 NA non-coding upstream 203385 34568185 ~ 34568765 (+)
LOC120567793 LOC100694462,LOC104944857 non-coding upstream 279773 34472849 ~ 34492377 (+)
G120237 NA non-coding upstream 336755 34433839 ~ 34435395 (+)
LOC120568810 NA non-coding downstream 20537 34792758 ~ 34797847 (+)
G120391 NA non-coding downstream 124314 34896535 ~ 34897133 (+)
G120393 NA non-coding downstream 132925 34905146 ~ 34905390 (+)
LOC120568917 NA non-coding downstream 181104 34953325 ~ 34954407 (+)
G120397 NA non-coding downstream 192925 34965146 ~ 34965540 (+)
pde4ca pde4c,LOC101063915,LOC100693394,LOC102791393,LOC102313416 other upstream 80530 34624276 ~ 34691620 (+)
pik3r2 pik3r2,LOC102792547,LOC100693657 other upstream 164394 34569394 ~ 34607756 (+)
G120249 rps15,rig,rs15 other upstream 314539 34453722 ~ 34457611 (+)
rps28 NA other upstream 368149 34400748 ~ 34404001 (+)
G120200 NA other upstream 454384 34317148 ~ 34317766 (+)
LOC120568940 NA other downstream 822657 35594878 ~ 35642033 (+)
G120716 NA other downstream 1633019 36405240 ~ 36405773 (+)
G120717 NA other downstream 1633900 36406121 ~ 36406689 (+)
LOC120568208 LOC103361715,LOC100701557,LOC100700197,LOC101469035,LOC102215562,LOC102289753 other downstream 2107697 36879918 ~ 37087443 (+)
G120914 LOC103396775 other downstream 2530673 37302894 ~ 37306014 (+)

Expression


Co-expression Network