trnal-uaa_11


Basic Information

Item Value
gene id trnal-uaa_11
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 37004601 ~ 37004683 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_584
ACCAGgatggccgagtggttaaggcgttGGACTTAAGATCCAATGGGCGAATGTCCTCGTGGGTTCGAACCCCACTCCTGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_584 True 83 tRNA 0.55 1 37004601 37004683

Neighbor

gene id symbol gene type direction distance location
LOC120567636 LOC108232809,LOC102291799 coding downstream 443954 36501801 ~ 36560647 (-)
LOC120567712 LOC107092464,LOC103396797,LOC102797029,LOC102291799 coding downstream 523281 36465612 ~ 36481320 (-)
LOC120568723 LOC103361715,LOC100701557 coding downstream 659075 36143287 ~ 36345526 (-)
LOC120567710 NA coding downstream 1040547 35962591 ~ 35964054 (-)
LOC120569092 NA coding downstream 1070849 35928630 ~ 35933752 (-)
LOC120568634 NA coding upstream 160165 37164848 ~ 37204970 (-)
LOC120568299 itgb1 coding upstream 292421 37297104 ~ 37331422 (-)
LOC120568250 LOC103366788 coding upstream 334376 37339059 ~ 37442761 (-)
LOC120567608 LOC102208532,LOC101487122,LOC100698585,LOC104929446,LOC104960242 coding upstream 1126228 38130911 ~ 38133834 (-)
LOC120567865 NA coding upstream 1839348 38844031 ~ 38884285 (-)
LOC120568215 NA non-coding downstream 134393 36869098 ~ 36870208 (-)
G120795 NA non-coding downstream 185180 36819198 ~ 36819421 (-)
LOC120568685 NA non-coding downstream 200960 36803072 ~ 36803641 (-)
G120775 NA non-coding downstream 298966 36704136 ~ 36705635 (-)
G120762 NA non-coding downstream 382190 36619836 ~ 36622411 (-)
G120845 NA non-coding upstream 55964 37060647 ~ 37060846 (-)
G120846 NA non-coding upstream 74619 37079302 ~ 37079531 (-)
G120848 NA non-coding upstream 83411 37088094 ~ 37088876 (-)
G120865 NA non-coding upstream 146866 37151549 ~ 37151884 (-)
G120936 NA non-coding upstream 290271 37294954 ~ 37296912 (-)
trnal-caa_5 NA other downstream 559 37003960 ~ 37004042 (-)
trnal-uaa_10 NA other downstream 4702 36999817 ~ 36999899 (-)
LOC120567714 NA other downstream 267351 36709295 ~ 36737250 (-)
LOC120567705 NA other downstream 1841620 35161809 ~ 35162981 (-)
LOC120568374 NA other downstream 1934814 35058781 ~ 35069787 (-)
trnal-caa_6 NA other upstream 33828 37038511 ~ 37038593 (-)
trnal-uaa_12 NA other upstream 34149 37038832 ~ 37038914 (-)
trnal-caa_7 NA other upstream 35056 37039739 ~ 37039821 (-)
trnal-uaa_13 NA other upstream 37935 37042618 ~ 37042700 (-)
trnal-caa_8 NA other upstream 38973 37043656 ~ 37043738 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) trnal-uaa_3 NA coding NC_035905.1 CM008308.1 24308808 ~ 24308890 (+)
mexican tetra (Astyanax mexicanus) trnal-uaa_62 NA coding NW_019172929.1 APWO02000036.1 1503014 ~ 1503096 (-)