zgc:136439 (LOC103367146,LOC106581848,LOC101483704)


Basic Information

Item Value
gene id zgc:136439
gene name LOC103367146,LOC106581848,LOC101483704
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 4816089 ~ 4818139 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU164256
ATGTTTCCCTTCTCTCCACCAGCTTGCAACATTAACCCTACCAGCTAACTGCGAACAAGCGAGCGGCGTTTCCACCGGTTCAGAGTTGAAATGAAGGCTGTAATTCTCGCCGCCGGGTACGGAACCAGGCTCCAGAGAGACGTAGTAGCCGACAGCAGCGGGAGGTTCGCTCACCTGGCCGGCACTGCCAAGCCGCTGCTGCCGGTGGGACGTTGTGCCTTGATAACCCACTGGGTCCATGCGCTGACCGCCTCCGGCTCCGTGGACGGCATTTATGTTGTTACCAATGCCCTTTACCATGCTGCATTTGAAGAGTGGGCATCACATTTCACAAATGTCAAGATTCTCAGCGATCAGACAAGAAGCAATGATGGGCGTCTTGGTGCTGTGGCCTGCCTGCAACTTGCAGTAAAGCACTTCAACATAGAAGACCACGTCTTAGTAATTGGCGGCGACACCCTCTTCAAAGAAGATTTTAGCCTCGGTAaagtaaaagaaaggttttcCGACCTCCAAGCAAAGTGTGAGGACAGCTGCCTGGTGCTCTCGTACCAGTGCAAAGAGGAGGAAACTCAGAAATATGGGATATTGGAAGTAGACAGTGATCTTCGCGTCCTCTGTATGAAGGAGAAACCTCTTCCTTCTGAGACAAAGTCAAGGAGAGCAG
>XM_039818576.1
TTCGGACTGGACGGCTAATCTCGCGAGAGGAGTCCGACTGGTCCGTGGAATGTTTCCCTTCTCTCCACCAGCTTGCAACATTAACCCTACCAGCTAACTGCGAACAAGCGAGCGGCGTTTCCACCGGTTCAGAGTTGAAATGAAGGCTGTAATTCTCGCCGCCGGGTACGGAACCAGGCTCCAGAGAGACGTAGTAGCCGACAGCAGCGGGAGGTTCGCTCACCTGGCCGGCACTGCCAAGCCGCTGCTGCCGGTGGGACGTTGTGCCTTGATAACCCACTGGGTCCATGCGCTGACCGCCTCCGGCTCCGTGGACGGCATTTATGTTGTTACCAATGCCCTTTACCATGCTGCATTTGAAGAGTGGGCATCACATTTCACAAATGTCAAGATTCTCAGCGATCAGACAAGAAGCAATGATGGGCGTCTTGGTGCTGTGGCCTGCCTGCAACTTGCAGTAAAGCACTTCAACATAGAAGACCACGTCTTAGTAATTGGCGGCGACACCCTCTTCAAAGAAGATTTTAGCCTCGGTAaagtaaaagaaaggttttcCGACCTCCAAGCAAAGTGTGAGGACAGCTGCCTGGTGCTCTCGTACCAGTGCAAAGAGGAGGAAACTCAGAAATATGGGATATTGGAAGTAGACAGTGATCTTCGCGTCCTCTGTATGAAGGAGAAACCTCTTCCTTCTGAGACAAAGTCAAGGAGAGCAGTAAGTTCACTATAAACACTGAACAAAGCCAATAATGCCTGTCCACATGGATATATCAGATCTTTAAAGTCATGGCAGAAAAGGGGGAGAGCCACCTGAAATGTTATTTAAATCATGAGAATAATGGGTTTACCAACCAGATCCTCTGTCCCTCCGGTGGAATCAGAAAGTATCAGGacaatgacatttttgtttGCGTCATCATATGCTATATTGTTCTTCAAAAGAAATTAAAGACTAAAAGGCCTCTTAGCTCGAATTAGGCAGTGTTTACATCTACATCAGATGTAGGGATTGTAACTCTTCCTTAGTCGCCTGATTTACCAAGTACATATAAAGTCATCATATTTAATCTT

Function

NR:

description
mannose-1-phosphate guanyltransferase-like isoform X1

GO:

id name namespace
GO:0009058 biosynthetic process biological_process
GO:0016779 nucleotidyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU164256 False 667 TUCP 0.52 5 4816138 4817784
XM_039818576.1 True 1071 mRNA 0.47 5 4816089 4818139

Neighbor

gene id symbol gene type direction distance location
sympk sympk coding upstream 932 4798829 ~ 4815157 (+)
LOC120569284 lypd1,LOC103370990,LOC104920802 coding upstream 99476 4689814 ~ 4716613 (+)
LOC120569891 LOC103370984 coding upstream 140408 4586403 ~ 4675681 (+)
ftcdnl1 LOC103370986 coding upstream 240668 4566539 ~ 4575421 (+)
stk17b stk17b,LOC103370988 coding upstream 290078 4513666 ~ 4526011 (+)
slc40a1 slc40a1 coding downstream 12541 4830680 ~ 4841508 (+)
stat4 stat4 coding downstream 54178 4872317 ~ 4894063 (+)
LOC120569565 NA coding downstream 80385 4898524 ~ 4915505 (+)
adat3 adat3 coding downstream 168394 4986533 ~ 4997937 (+)
alkbh6 alkbh6 coding downstream 173531 4991670 ~ 4993809 (+)
G122106 NA non-coding upstream 43696 4771055 ~ 4772393 (+)
G122041 NA non-coding upstream 128136 4687606 ~ 4687953 (+)
G122040 NA non-coding upstream 130508 4685140 ~ 4685581 (+)
G122038 NA non-coding upstream 132043 4683455 ~ 4684046 (+)
G122039 NA non-coding upstream 179109 4636573 ~ 4636980 (+)
G122115 asnsd1 non-coding downstream 476 4818615 ~ 4819436 (+)
G122120 NA non-coding downstream 27188 4845327 ~ 4847155 (+)
G122142 NA non-coding downstream 126594 4944733 ~ 4946608 (+)
G122148 NA non-coding downstream 154712 4972851 ~ 4973737 (+)
G122225 NA non-coding downstream 276485 5094624 ~ 5152883 (+)
G122036 NA other upstream 95246 4718285 ~ 4720843 (+)
lrrfip1a lrrfip1,LOC102295012,LOC102195615,LOC100691582,LOC103370951,LOC107396304,LOC107099056 other upstream 463166 4294851 ~ 4352923 (+)
G121917 col6a3 other upstream 705656 4108030 ~ 4110433 (+)
cops8 cops8 other upstream 743975 4061037 ~ 4072114 (+)
ndufv3 NA other upstream 1844757 2962205 ~ 2971332 (+)
G122128 NA other downstream 76646 4894785 ~ 4895502 (+)
fkbp7 fkbp7,LOC102196462,LOC104949636 other downstream 156650 4974789 ~ 4982979 (+)
LOC120569936 LOC102781033,LOC104920804 other downstream 241862 5060001 ~ 5070248 (+)
G122226 NA other downstream 346094 5164233 ~ 5165898 (+)
ybey ybey other downstream 390963 5209102 ~ 5211902 (+)

Expression


Co-expression Network