G122157


Basic Information

Item Value
gene id G122157
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 4773988 ~ 4776306 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU164316
TCTCTGTTAAGTACTCCAGCCTAGTCTTTAAACGCCGCCGTTCAAACTCCGTTATGAGGATCCCGGCAAGGCACGAACATTCCAATGGCCTCCTCCATGCtggtttgttgttgtatgtGGCGCTTAAGTCTAGTGACGACACTATAAAGACCGTCGCTGTGCTTGCGTcgctcccttacccctcctaccagtccctatggccacttggccagtgtgaatgcaaatggcaaaACCGGTTTTGGGGGGAGAGTAGTtggtagaactgtttagaagggGACTGtccctataactacgttcctgttaCTACTTGGTCTGAAAGAGGCTAATGTCACCGACTCTGCTGTTCTCCTCAGCGTTTTAGCATttgtagctgtttttttttgtccagtAACTCTGCTCAACCCTGTTTCAGCAGGCAGCGGGTTTTAGTGGAGAAACTCTAAAAACCCTCTGCACACCACCTGACTAGTAACAAATGCCAGAGCGACatttttctcaggagttggtggaaaGGAGGGGGAATATTTATACTTCCTTATGTTAGGAggccagaaacatgactccaaatgaatgctaatgttgctggATGTCTGCTAAATTTTGTCAATAGGCAATTATTTGCTTATACGTTCACCACAGCAACCTTATTGGGTAATAATATGTCAACGTTTTTCTTCCTGCTTGTTCTGCTTCCCCCAAGTGTCGAAAACATCTTTTAATGCAGCTTTAGTAACATTTTGGTAGATTTTGCAATAGTTGATAAAGCTTTGGATTTCTGCTATCTCATCCCTGCTTTCAATCAGTTGTTTCTCTTTTAACATCTGTTAAGTATATGTCTGACTGACGCCCTCAGTGTTTGGACATGGCGGTGAGTAAGAGGGACAGAAGATAAGCAGGACAGGAAGATCATCACGTAAATATTTGAGATCAGAGATTGGCCACCCACTTCACAATGTCTGCATCTCAGTGAAGTTGCCCGTCTGTTCACTACTCATAGGTTTAGACAGGCTTCTACCAGCTGCTTCCCAAACCCGCAAAGTAATTGCCTGCAGGGCAGAGAGAGATTTTGAACTCAGCATGTGGTTTTTAATAGAGGCGTTAGTGGGGAAGGAGAACAGTGCAATTTAGGACAGACTTAAGCCTGTCTGCTGGGTAGGGAGTGTCTAATGGAAGAGCAAATGCAGGAgcaagtgtatgtgtgttcacTTGCATAGAAGTAAGGCTGCAagtgatgtttttttcattaaagATTAACcttttgattattattttcagttaaatgatgaagtgtttaatatttaaaaaatacaaaaaaaacacatcacatgCACATAACGCAACGATATTCAACTTTGGCAGTTTTACTcaataaatgattaaaatgatGAATGGACAAGAACGTTTAAATGCTGTCTCAAAGACTACGCTGCCAGAAATAAATTTATGGTAGGGAAATACTGAATGTTgttcatttaaagtgctcatattaggcaaattttcaggttcataattgtatttagaggtaatatcagaatatgtttacatggtttaattttcaaaaaacattttttgttgtactgcacattgctgcagctcctcttttcaccctgtgtgttgagctctctgttttagctacatagTGAGACAtgacacttctgttccatctttgttgggagtcgcacatgtgcagtagctaggtaaggactactagccagtcagaagcagagtatgaggacgtacacgctagcagctaggcgagcattataacgtgtgttccaaagtaaaggctggactacaatagagctgtttggagcagttggtgaacagtgttttctgttggagatggtaagtcccttttgtaaacctataacatgcacaaaaaagatagataacacaataaaggaaaggggaaaaagccaaaaagcataatatctGCACTTTTAGACgtagtaaaatataaaatcttaaaatactAGAGTGAGCTAACTAAATACCCTCCATGTTTAACCTTTTAAACTGTACGATGTAAACTCCTCCCAGGTTTCTAAAACCCCCGAATTCTCAGAAAGAAATGGAGGGCGGGTCCCGTGTTGCCTATGCTGACTTGTTGCCAGGGGCGTGGCTTCCCAGTCCTTTAGCATTATGTAGGTAGCCACCGTGGGCACCCTTTAACAGGCGTctccttttaaaaaagaaaaacgtaaAAAACTACAGGACCAAAAGAGTCGTTCATGGGGTGGTTCGCTAGTTGTGGTTGAGTTGagtctgcccccccccccttgtaaAAATCAATTGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU164316 True 2298 lncRNA 0.42 2 4773988 4776306

Neighbor

gene id symbol gene type direction distance location
gpr39 gpr39 coding downstream 10826 4718956 ~ 4763162 (-)
c12h2orf69 LOC103370987 coding downstream 207872 4526200 ~ 4566116 (-)
tyw5 tyw5 coding downstream 364339 4402396 ~ 4409649 (-)
LOC120569352 LOC100691311,LOC104929831,LOC103373061 coding downstream 483041 4287338 ~ 4290947 (-)
LOC120570037 LOC103373060,LOC108249332,LOC102294704,LOC102195324 coding downstream 582096 4176670 ~ 4191892 (-)
asnsd1 asnsd1 coding upstream 42288 4818594 ~ 4821932 (-)
LOC120570304 NA coding upstream 45513 4821819 ~ 4822877 (-)
wdr75 wdr75 coding upstream 69030 4845336 ~ 4872142 (-)
osgepl1 osgepl1 coding upstream 210093 4986399 ~ 4991501 (-)
ormdl1 ormdl1 coding upstream 221356 4997662 ~ 5001822 (-)
G122155 NA non-coding downstream 1602 4771173 ~ 4772386 (-)
G122103 NA non-coding downstream 8347 4765425 ~ 4765641 (-)
G122095 LOC101478416,LOC102195885 non-coding downstream 58421 4715187 ~ 4715567 (-)
G122092 NA non-coding downstream 61303 4712471 ~ 4712685 (-)
G122089 NA non-coding downstream 63055 4710692 ~ 4710933 (-)
G122167 NA non-coding upstream 36857 4813163 ~ 4815383 (-)
G122178 slc40a1 non-coding upstream 62098 4838404 ~ 4841642 (-)
G122189 NA non-coding upstream 134326 4910632 ~ 4910888 (-)
G122209 NA non-coding upstream 265191 5041497 ~ 5041787 (-)
G122288 NA non-coding upstream 342827 5119133 ~ 5122669 (-)
col6a3 col6a3 other downstream 613849 4107999 ~ 4160139 (-)
steap3 NA other downstream 1312285 3426024 ~ 3461703 (-)
G121877 clg16-21h2orf76,LOC101472530,LOC102207757,LOC108238817,LOC102789177,LOC103368446 other downstream 1334322 3414399 ~ 3439666 (-)
G121832 NA other downstream 1387523 3386067 ~ 3386465 (-)
G121794 NA other downstream 1499502 3273862 ~ 3274486 (-)
glsb gls,LOC100711430,LOC102197968,LOC101482051 other upstream 141353 4917659 ~ 4972611 (-)
G122404 NA other upstream 1235734 6012040 ~ 6014195 (-)
LOC120569614 NA other upstream 1864575 6640881 ~ 6681994 (-)
pcbp3 pcbp3,LOC100710924,LOC107660579,LOC103138153 other upstream 2006140 6782446 ~ 6871212 (-)
tmeff2a tmeff2 other upstream 2405625 7181931 ~ 7317632 (-)

Expression


Co-expression Network