G122288


Basic Information

Item Value
gene id G122288
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 5119133 ~ 5122669 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU164487
CTCCCTGGatacataaaaataattttaatacaCACTgatagaaaacacacacagagtaatgGAAACTATGAGGTCAAATGGAATAGGGAATAAAGAGGCAGGGCATTGCAGGATGACATGATTTTATGAATAACAGAAaccttttttatgttgtttaccACAAGGGAACAATTACAATTATTGTCAAATACATCAAAAACATACCCCTTGTCACACACTGACTACTGCCGAAGCTAATACatcactacaatacattactTCTATTTTCAAATACATTGGCTAAACACTTCATAATATGTAACAGCTGAACCTGACTTTAACAGCTTTCTAAAAACCTTGTGGTGCGTTTTATAATCCCAACATTTGAAATCAAACAAACTGTTTATTATAATCTACTATAAGGTAGCAGGGTGAAGGATTCCTGGTGGCAACTTGTCTTGTTTCCTTCATCTTCATCTAGTCCGAGTCGCTGCTGGAGTACCCATGACACGTGCTTCCTTTCTTGTGACCATGATTGTGTTAGCAGccatgatggtgatgatgaccATGATGATGACCATGATGATGTCCATGATGATgaccatgatgatgatgatgatgacgatgccTGTGCTCATATCCCTGCCAAGACTCATAGCCAGGTCCATACCCTCCATAAGGTGGGGCTACAGTACCGTACCCAGGTGCACCCCAAGGCTGAGGAGGGTAGACAGTGCCTGGTGGATATTGGGGATTGTATCCTCCTGCCATTGGCTGAGGAAAAATGGCTGAGAGAAGCCGGTTTCCTATGTTATTCCAGTTCATCTCAAAAATCCAGATCCAAACCCTGAAACTGAGAGAAACCACTTAAATGCACACAAATCCCCTCTTAACAGAGgaaaataaatgactttttatgaaaatgCAGACATGACCGGTTTTAAAACCTAAAATACTATATTGTCTAGAAACAAAGCAAATGCTGTCCACTTAACTGTGGAAATGACAGTGTGCTTTGTAAAATGTTGCAAACAGGCAGAGCTGGTCAGAAATACCATAAAGCCAAGTCACACATGACTGTATAAAGACAAAGCTACCCATGGGTATGACTTACTGATATAGACATGATCACAAAATAATGCAATACAGTTAACAAAGGAAATACATGTACGCAAACACACATGTTGTATGCTTAGAAAGGTTCTAGTGAACTCACCGTGTGCTGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU164487 True 1207 lncRNA 0.40 3 5119133 5122669

Neighbor

gene id symbol gene type direction distance location
LOC120570040 NA coding downstream 20297 5094485 ~ 5098836 (-)
hibch hibch coding downstream 26608 5069166 ~ 5092525 (-)
mstnb NA coding downstream 64510 5050498 ~ 5054623 (-)
ormdl1 ormdl1 coding downstream 117311 4997662 ~ 5001822 (-)
osgepl1 osgepl1 coding downstream 127632 4986399 ~ 4991501 (-)
LOC120570600 NA coding upstream 17327 5139996 ~ 5146102 (-)
LOC120570601 NA coding upstream 29665 5152334 ~ 5160454 (-)
LOC120570458 lss coding upstream 49450 5172119 ~ 5186282 (-)
LOC120570456 LOC106512812 coding upstream 63874 5186543 ~ 5208674 (-)
usp37 usp37 coding upstream 89643 5212312 ~ 5232238 (-)
G122209 NA non-coding downstream 77346 5041497 ~ 5041787 (-)
G122189 NA non-coding downstream 208245 4910632 ~ 4910888 (-)
G122178 slc40a1 non-coding downstream 277491 4838404 ~ 4841642 (-)
G122167 NA non-coding downstream 303750 4813163 ~ 4815383 (-)
G122157 NA non-coding downstream 342827 4773988 ~ 4776306 (-)
LOC120570604 NA non-coding upstream 41403 5164072 ~ 5166525 (-)
G122347 NA non-coding upstream 425968 5548637 ~ 5552149 (-)
G122352 NA non-coding upstream 450029 5572698 ~ 5573559 (-)
LOC120569308 NA non-coding upstream 452765 5575434 ~ 5579670 (-)
G122363 NA non-coding upstream 705954 5828623 ~ 5834225 (-)
glsb gls,LOC100711430,LOC102197968,LOC101482051 other downstream 146522 4917659 ~ 4972611 (-)
col6a3 col6a3 other downstream 958994 4107999 ~ 4160139 (-)
steap3 NA other downstream 1657430 3426024 ~ 3461703 (-)
G121877 clg16-21h2orf76,LOC101472530,LOC102207757,LOC108238817,LOC102789177,LOC103368446 other downstream 1679467 3414399 ~ 3439666 (-)
G121832 NA other downstream 1732668 3386067 ~ 3386465 (-)
G122404 NA other upstream 889371 6012040 ~ 6014195 (-)
LOC120569614 NA other upstream 1518212 6640881 ~ 6681994 (-)
pcbp3 pcbp3,LOC100710924,LOC107660579,LOC103138153 other upstream 1659777 6782446 ~ 6871212 (-)
tmeff2a tmeff2 other upstream 2059262 7181931 ~ 7317632 (-)
traf3ip1 traf3ip1 other upstream 3276916 8399585 ~ 8448430 (-)

Expression


Co-expression Network