G122474


Basic Information

Item Value
gene id G122474
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 6640282 ~ 6679803 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU164705
acacagacacacgcacatacatccAGTGGCTTGGTAGATGACGTGCAGCAGTCTGCATGTAACTACATAATGTTGATGCAAGGTGTAATGTCAAATTCAGACAAAATGTATCAACATGTACAAATATCTGCCAATAactgtaaactgctttggcaacatgtttttttttctccatcccACTAAAGctCCCCATGATTGATTAATGTTCCTTTATTGCAATTTGATGATGAGATCACAGGAGtcataaaaagagaaaaagaaaaaatattgcATGGAGAAAAAAGACCTATATAAGCAAGCAAACTTATATATAGCGCATGCAAATACATGTATGAacatatacataaacacatacatagTAAACTTAGTTCTTCTAAAGAACCAGATTTAATAGCATGATGCTTACACTTAATTAACATCTGCAGAAAAACAACAGTAAAtgcaaaaactatttaaaaaaggaagacaCTGTTAAGAAATTTTAAAATACGCgatcgtttgatttctgaggaggaaggagagacttgggtcgaattgaaagttaagcaaaaggtttaataaaacagcatgatgaaaacgacatgacaaaaacaatcaaaaataaaacatgaaacactgccagcagtggactacaagacatgcttccccttgtggGGTCACAGTTTGCAGTCCtgtgacatgacaaaacaatacactgtaaacagcggactgcAGAACCTTGTTCCCTTGTCGGGTCCCAGGCTCGCAGTCCCGAAATCCCCTCTGTTTCCGCATTATATTCCTGTAGAATTGTGGGTGTTTTCCTTGAATGAAAAGtctctcaggttaaggacacacctgatttcaggtttactccaggtcacagacaaaagTTGGTTATCATGGTACTGCCGattctattcaagtttacagatatgcatttcctttgttctaatcaagtcTAGCCcagcagggagtggctccccaaaatgcagagacaacagttacctttcctgtggggacaatgagtcttctCCAGTATGCTAAATGACAGATATGACCCATCCGGCCTACATGGATGACAGTTCTTATAGGGACACCCTATTGAGCATCTTCCTCTTAATATAAGTTAGCAAACAGCCTGAGTAGACACTGGTGATGGGAAAGAGAGCTGGCTGAAGATCTGGTAATGGATGATGATTATTGCATAATATTGCAATATTTGATGATGAGATCACAGgagtcagaaaaaaaagaaaaagaaaaaatattgcATGGAGAAAGTGTAAGCAATTGTGTATataacacatgcaaataaacataGTAAACATAGTTCCATATTTAATAGCATGAAGTAAAACTTAATTAACATCCCCAGAAAAACAACAGTAAATGctaaaactattttaaaaagcAAGACACTCAATAACCCCAGCCGGCCTACATGGATGACGGTGCTTATAGGGACACCCTATTGAGCGTCTTCCTCTTAATATAAGTTAGCAAACAGCCTGAGTAGACACTGGTGATGGGGAAGAGAGCTGGCTGAAGATCTGGTAATGGATGATGATGGAATGTGGAGCGGGTCTTGTGATGAGTAGAGTTGGAGGAACCCTGGGCCCTGGATGTAATGGAGACTGGAGGTGAATGGGGTGGCCACCATGTTTCTTGGCCTGTTCAGTGAAGAGAGGCTAACAAGAGTAAAGTATTCATCTGATTTGGAGGAGGTTAATTTCTCTTTCCACTATCTGGCTCTCTGTTCTaaactattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacctgagaGTCCGGCAGTGTCTCGTCTACT
>TU164706
GTTCCTTTATTGCAATATTTGATGATGAGATCACAGGAgtcagaaaaaagagaaaaagaaaaaatattgcATGGAGAAAGTGTAAGCAATTGTGTATataacacatgcaaataaatgtgtgaacatatacacaaacacatacatagtaaacctaaaaaaaaagtacaacttAATTAACATccccagaaaaaaaacagtaaatgctaaaactattttaaaaagcAAGACACTCAATAACCCCAGCCGGCCTACATGGATGACGATGCTTATAGGGACGCCCTATTGAGCGTCTTCCTCTTAATATAAGTTAGCAAACAGCCTGAGTAGACACTGGTGATGGGGAAGAGAGCTGGCTGAAGATCTGGTAATGGATGATGATGGAATGTGGAGCGGGTCTTGTGATGAGTAGAGTTGGAGGAACCCTGGGCCCTGGATGTAATGGAGACTGGAGGTGAATGGGGTGGCCACCATGTTTCTTGGCCTGTTCAGTGAAGAGAGGCTAACAAGAGCAAAGTATTCATCTGATTTGGAGGAGGTTAATTTCTCTTTCCACTATCTGGCTCTCTGTTCTAAACTATAGAGGTGtacaaaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacctgagaGTCCGGCAGTGTCTCGTCTACTGTGCcttttggtttcacagtCACTGATACATCTATATCCCCATCAACATGAACATCAGATATACGATCAGTACAAATCACACTGCCGCCACGTGCAGAGCAATCTGCCTGCGCTACTTCTCCACCAGCTTTTCCTagaagaaaaatgaaagaaaatatgtGCTCAATTCAAATATTGCCTTCTTGTATTGAGACGTGTTGAGGAATATTACTGCTTACCACTCGGACCGCTTCCTGCATCACTCACTGTTTCAAccgccattttgaatttttttccttttatatttttgattgtTCTGTCGGTAACAACACTGTTGCTATCGGCGACTGGTCGTGTCCGTGGGCCTGTAAA
>TU164709
atgttaaattcccatagaggcaggcagatgtttatttttaaaggccagttatttcatggatccaggatactatgcatcctgatacaGTTCCCTTGGCCGTTGGAATTaaaataaccccccccccccacatcatcacatactcttcaccatacctagagattggcatggttttatttgttaacctaatagctggtttgatttgcattgagagatgatgttatggaaagtaccccatgccaatctctaggtatggtgaagggcctGCCTCTATGgtaatttaacataggggtgtacttacttatgccccctgtattttaagaagaacatttatttatttacgatacattattcattcacaaagaaaattggtgtccttaaaggtcggaaacatttttattcctctttttattcaactttagcatgggttcataaacttatgagcaccactgtatacacaaacacatacatggtAAACATAGTTTAGTAACAGATTTAATAGCGTGAAGCAACACTTAACAtccccagaaaaaaaaacagtacatgcaaaaaatactgtattttaaaaaggaagACACTCAATTGGGTGTCCCTAACCCCAGCCGGCCTACATGGATGACGGTGCTTATAGGGACCCGCTATTGAGTGTCTTCCTCTTAATATGAGCAAGCAAACAGCCTGAGTAGACACTAGTGATGGGGAAGAGAGCTGGCTGAAGATCTGGTAATGGATGATGATGGAATGTGGAGCGGGTCTTGTGATGAGTAGAGTTGGAGGAACCCTGGGCCCTGGATGTAATGGAGACTGGAGGTGAATGGGGTGGCCACCATGTTTCTTGGCCTGTTCAGTGAAGAGAGGCtgtgtacctgagaGTCCGGCAGTGTCTCGTCTACTGTGCCTGAGAGAGGAAAGCAGTGTTAGGATTTGCTGAAATGTCCAGACGGAATATATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU164705 True 1872 lncRNA 0.40 2 6677906 6679803
TU164706 False 1082 lncRNA 0.42 2 6670455 6671647
TU164709 False 950 lncRNA 0.42 2 6640282 6641482

Neighbor

gene id symbol gene type direction distance location
calcrla LOC104930425,LOC103374150 coding upstream 74977 6516857 ~ 6565305 (+)
tfpia NA coding upstream 125605 6440380 ~ 6514677 (+)
col5a2a col5a2,LOC103365627 coding upstream 411897 6148572 ~ 6228385 (+)
LOC120569363 NA coding upstream 630540 6001841 ~ 6009742 (+)
LOC120569854 LOC103364251,LOC104945362,LOC101061545 coding upstream 703161 5922694 ~ 5937121 (+)
obsl1b LOC102294552,LOC102213482,LOC101473351,LOC103371765,LOC108244293,LOC107092720,LOC106522278,LOC103461888,LOC106964354,LOC106906652 coding downstream 325764 7005567 ~ 7044051 (+)
slc39a10 slc39a10,LOC100706809 coding downstream 1214077 7893880 ~ 7926521 (+)
parp9 NA coding downstream 1390875 8070678 ~ 8077603 (+)
gjc4b LOC104925882,LOC103356261,LOC104959787,LOC101482455,LOC102792484 coding downstream 1441804 8121607 ~ 8130460 (+)
agr1 NA coding downstream 1741763 8421566 ~ 8425479 (+)
G122477 NA non-coding upstream 87 6639959 ~ 6640195 (+)
G122472 NA non-coding upstream 50581 6581813 ~ 6589701 (+)
LOC120569780 NA non-coding upstream 62447 6577079 ~ 6577835 (+)
G122446 NA non-coding upstream 229043 6411034 ~ 6411239 (+)
G122443 NA non-coding upstream 272833 6367148 ~ 6367449 (+)
G122556 NA non-coding downstream 316539 6996342 ~ 7045793 (+)
G122584 NA non-coding downstream 456674 7136477 ~ 7136721 (+)
G122585 nabp1,LOC107092718,LOC105938019 non-coding downstream 459245 7139048 ~ 7141280 (+)
G122645 NA non-coding downstream 647283 7327086 ~ 7327327 (+)
G122646 NA non-coding downstream 666204 7346007 ~ 7346239 (+)
ybey ybey other upstream 1428380 5209102 ~ 5211902 (+)
G122226 NA other upstream 1474384 5164233 ~ 5165898 (+)
LOC120569936 LOC102781033,LOC104920804 other upstream 1570034 5060001 ~ 5070248 (+)
fkbp7 fkbp7,LOC102196462,LOC104949636 other upstream 1657303 4974789 ~ 4982979 (+)
G122128 NA other upstream 1744780 4894785 ~ 4895502 (+)
G122588 NA other downstream 466822 7146625 ~ 7149039 (+)
hdac4 LOC103356262 other downstream 1490897 8170700 ~ 8316693 (+)
G122846 NA other downstream 2115650 8795453 ~ 8796746 (+)
umps umps other downstream 3240821 9920624 ~ 9928891 (+)
lrp1bb lrp1b,LOC102779748 other downstream 3656188 10335991 ~ 10618696 (+)

Expression


Co-expression Network