G122880


Basic Information

Item Value
gene id G122880
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 9001053 ~ 9001424 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU165257
GTCAAGGCCCTCTCTGTCTGAAACATACTCAAGCCACTGTATTGAAACATCagaacatgtcttgttttgcctaAGGTAGGCCCCTTCGtatgtcagagcaacagaatctTTGGGGAGGAACAACGTTTTAAATACACCCATACATGAGGAGGCCAATGTAGCGTATGCAAACGGGTCTAGGCCTGTGCACTCGTGGAAGGCCTCTCTGTATATTTTGCATGCTTTAATCAAAACCgttacatcgttaacacaatagCTGAGCAGCTCTTTTCGAAAGTCAAAAGGTGTGTCGCGGACCGTAACGTACCACTCCATGAACGTTTTCTTAGAGGCGTCACTCATAGCATCATAACCATATAGAGCTGGTGCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165257 True 372 lncRNA 0.46 1 9001053 9001424

Neighbor

gene id symbol gene type direction distance location
LOC120570049 NA coding upstream 43352 8901648 ~ 8957701 (+)
tmem163a tmem163,LOC104923143,LOC101468446,LOC103460319,LOC108238566,LOC103356089,LOC103131020 coding upstream 115427 8805817 ~ 8885626 (+)
map3k19 map3k19 coding upstream 207744 8775731 ~ 8793309 (+)
ube2f ube2f,LOC102789309 coding upstream 320590 8632256 ~ 8680463 (+)
LOC120569558 NA coding upstream 385774 8610378 ~ 8615279 (+)
LOC120569945 NA coding downstream 184512 9185936 ~ 9196127 (+)
tmem177 tmem177,LOC102787076 coding downstream 195393 9196817 ~ 9200777 (+)
ptpn4a NA coding downstream 201791 9203215 ~ 9284240 (+)
epb41l5 NA coding downstream 288020 9289444 ~ 9330476 (+)
LOC120569754 LOC102780892 coding downstream 840718 9842142 ~ 9847759 (+)
G122875 NA non-coding upstream 2871 8997246 ~ 8998182 (+)
LOC120570217 NA non-coding upstream 8062 8991682 ~ 8992991 (+)
G122847 NA non-coding upstream 129944 8793447 ~ 8871109 (+)
G122787 LOC103364996,LOC104926113 non-coding upstream 535362 8461507 ~ 8465691 (+)
G122779 traf3ip1 non-coding upstream 586757 8408779 ~ 8414296 (+)
G122895 NA non-coding downstream 56129 9057553 ~ 9057935 (+)
G122902 NA non-coding downstream 142673 9144097 ~ 9148297 (+)
G122909 NA non-coding downstream 177689 9179113 ~ 9179319 (+)
G122910 NA non-coding downstream 182451 9183875 ~ 9184154 (+)
G122970 NA non-coding downstream 487529 9488953 ~ 9496210 (+)
G122846 NA other upstream 204307 8795453 ~ 8796746 (+)
hdac4 LOC103356262 other upstream 684360 8170700 ~ 8316693 (+)
G122588 NA other upstream 1852014 7146625 ~ 7149039 (+)
ybey ybey other upstream 3789151 5209102 ~ 5211902 (+)
G122226 NA other upstream 3835155 5164233 ~ 5165898 (+)
umps umps other downstream 919200 9920624 ~ 9928891 (+)
lrp1bb lrp1b,LOC102779748 other downstream 1334567 10335991 ~ 10618696 (+)
LOC120570060 NA other downstream 2250493 11251917 ~ 11260642 (+)
serp2 NA other downstream 3006233 12007657 ~ 12013200 (+)
G123539 sept10,LOC102785043,LOC103375466 other downstream 4048334 13049758 ~ 13279866 (+)

Expression


Co-expression Network