G123078


Basic Information

Item Value
gene id G123078
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 10147001 ~ 10152280 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU165524
TCTGGATGGTGAAGTCATAGATCTTCTTCCCTGCATTTGCCCTGAAGAACTTTCGGTACTCTCTGCGGACCTTTTACAGCAATAAAGGAAAGCATAAACAAACTGTCAATCACTGTTTGCCAGCCATTAGTCAGATGTGaagcaggggaaaaaaaaattaaaaataaggaGTACACTGATAGCAGGATGGCAGTACAGACAAATGGCACACTAGAACAACAGCAAAGGGTTAgtcacaaacaaacaatgaacaCCTGGAACAAAGTCAACTCCAAGCTGCTGGAATTCATTGAAATTACGACAATGACTCATTTCTGAGAAGTGAATGATGGTTATGACAAATGGCCTTCACGCTGACCTTAATTGCACAAATTGAGTTGTTGACAGGTGCATTGTTCGGTGCAGGGTGGTCAattaacacaaagaaaagatTAACACTGCAACAAATGACCAGTGTGACGACAGTTGTTCTGGTAAAACCAGAGAGACACGTAACAGATAAGCACCAGAAACtaggacacacggacacacacacacacacggacacacacacggacacacacacggacacacaaagacaaagagatAACAAGTAAAACAAATACTGTTAGTTGCACAGATACAGAGGGGGACgtatagaaaagaaaagatcagaaagagagacagagacagattcTGGCCATGTCAGTCCGGCTCTGTTGGTTTAAATCTTcagcattaaaaaacaaaatgatgaaaatattaataatgatCTCGACTGTAGCTAAAATTCTGGATTTATGGGGAGGAGGTTAACCTTAAAGTACCTTTGTTACATCTTTGCGTACTATTTCCGATCCAAAAAATTTTTTGAATGAAAACTGTTGATGTGAGGGGGTGTTGATTATGTTGAGTAACCAGCGCTCGGTTTCATGGTTTCAAATGTAACTTTTCAAAGCTTTGAGCGCCTCAAATAAAACTCCATCCACCTCCATTGCAATGGAGTGGTGGCAGAGATCTCAAAACCTCTGCAAATAATCACGAAAAATCTGCATGGCTAGAAACCGCTGGGGTAAACTGGAAaggtttgtgtctcttttgtgGACTACAGaccctttgcacgtgacgtcacactctactcccgcgaattatgaacgccatgacggacggcggaagagCTATTCTGTAGATGGACGGCAAGTCAAACAAGAACGTGTTCGCTGCTGTGTATGGTTCGCTGTTCTTGTTCTCACGAgtcacatacacaatctgcagagtaatcctcaccaacacaagcatgtgtatgtattgcctttctgttttaaatgactgataaataataataaaacttcctcacccagctagctgccgtgctaaccagctgttcctgctaacaggtcccacataactatcatcggttattcactgacctacatatcccaaaaagtaagccgttcccttgatcatttaacttaacacgcatacaaaaaatattggttaaattaaagatgacatggcacggaaactagcttcaaaaaggccaaacaactgaattaaatgcGGGTCTGCGGAGCTCCTACCCCGGTTAGCTAGCTGTCGAAATATCCACCGGTCAACAGCgaatataatcacagataaAGATGATGGCTAGATGTTGcattatgtgtggttaatacTACACTCCgtgatttactgcatggattaaCGTGTAATTAATTATTTCGCAGAGCTGGGATGCGTTCAGGCATCCATTAGAGAGTTGCACCGGCTCAGCCAGTGAACAACGGTAGCCTAcgtgcctgtagctagcttgccctgctagctgatagccgttagctgctagctgccgtcctgtgagtttattcagacaggcttctgtaataatcatcccaataacaatccacggtggtgtggctatgtcctccagaggacaggtcatgtcacgtaTTGAAGcgtattcccccctaaaaaaaaataaaaaacagtagtgcggtagtagctgctagttgtagcaagaaaaggtaaacagtagtgtgctgatcggagcgtagtgtgtgaagagcagatttgtttacaagggaagaagcttggagtaacgtaactatggagaatatagcagatatacaacacagggaagagccttttgagttatATGGTCGTCCTTATTCATTCGAATCCGAGTATAGGCCTACAGTCGAAGAACTAGCctcacaagagttggaaagaacgagacagacagaggggcaacaggcagatgaacttgctgctccaagcgcaagctaaagctagccttcagtaactggaagacatagccacaccaccaccgctccatggattgttattgggatgattatcacagaagcctggctgacttattattattattattatatttagtgttatttatttgaaactaatgaaactttccgcTCGTCTAATACACTatttagcttgtgcttccggtgattctgccgtccgtcatggcgtcgtCACGTGGTCGTGATCACCTGTTTGCAAAGGGTCTACACCTTTAAGATGAGGTGACATCATTGTGTTCAATACATTTCTCTGGGCCACACAAGTGATGCAGAGGGACTGCAAGTCCCACAAGACTGCACTGCAACGGGAAATGGGATTTCCATATTGGAGGAAAAACATTGCatcaagaaaaagaaagaaaaactagGACAAGTCGTCTTTGCTCAAGTAATTCCTGTAGAACTGTTATGTGTTGTGGTGGTTTAGCATACAttagatttttttgtcattttagttGACTACGCATAAAACCAAATGTTTCACGGTTTTGATTGTGGGAACTGCAACAAAAGATGATTTGATGGTCTTTATCAGCCAATAGTCATGTGTAACCTTGCATGTTCCAATGTGCTTAACCTTGGTCAAAAGCATCAAAAGCACAGTCTAAAGCAATGCCATCATGGTTAAAGTGTGAGCACAGCACTAGGCagacactggcttcctgtacaAGTGTGCGTATAGCAGACGgttgaggaggatgaagaggggCAGGGGTGATGGGTAGGTGGCAGACTTTGGTGATGGCTGCGCTGTGGGGCTGGGAGGTACCTTAAGTCCCTGCCAGTAGGCCCAAATCACAGCGACAGCATGCTTACGCCTGGCCTCTTCCTTCAGTGTCCTCAGCTCCCTGCGAGCCTGTTCAGGGGGACGGGAAGAGACGGAGAGCGGGAACAAATGAAGCGAGAGAAGatgagaggaagaagagggagacACTGTTTTGCCTGAAGTCAGCAATcatcaaatatatatacacccacacacacacacacagccacacacagcaGCCCTCTGTGACCATGGAGAGACTGTAAAAAGTACAGCTCGACTGCTCCAGACTCCAGAAACAAATATGGCACACATTTATCAGGGGAACTTCTGGAACGGAAACAGACTTTTAGTGGAACTTTGAGAGCAACAGGCGGAGAGAAAAAGTCACAACTCAGGCAGCAGACGTCACCCCAAAAGGATCCAAACGGTtccatctaaaaaaataaaaaataaaaaaggacaaacGGTGCTGCGATGCAAAGAGTAAACATGCATTAACTACACGACAAAGGAAGAAGTCATGCAGAGGGCAGGCATCATGCACTGGTGAGGCATGGGCCTTGGAGGAAGAAGCTGAAAACGCACCCAAAACATGACCTGATCATGTTTGAGAGGGTGGAGGCTAAACTACCTTACATCACACATGACATGTTTAGATTGGGTTTAGCAGAATGATGGGTATGttgagtgtttttttgtttttttgagggGGATGGGTGGAGGGCTTCGATGGAGGCGGCAAGTCACGGCAAGTCAAGTCAATAGGCTTCCCAAATACCTTGGTGCCCTGCCAGCCGGCCCAAATGACCGATACGGCATGTCTATTCCTCGCCTCCTCCTTCAGCTGACGCAGCTCTCTCCGGGCCTGATGAAAAGCGGTGGCAGTTgcggggagggggaggggggtggttAATTTCAGTGACATTCAAAACATAATGGTCCCAAGAGAGGTACTGAGTAGGTGTGAAAAAGCATTGACGAAAGACAACATAAGGATTGTCCAGAGATGGGACAACGGGGTGGTTAACATCAACGTGCCAGCGACTTTCAGTGGCGCTCGCATTTTGGGACTCCGTTAACCCCATGCTTAAGAGGAAATAAAAAGTCGGAATTATCATTACATTATCGAGAGCTTCATAAAAAGAGGTGGAGCAAAAAGAAGAACTAAGAACAAAGTTTGCATACAACACACAATAACCTTTAACAGCATCTATGAGTCATCAGCAGGCTACGAGACCTTGAAATAAAATTTTGATTATCAACAGCCAGGGGTATGTCAAATGATAACGCTGGTGAGTAAATGCTGATAAGATGTTATACTTGCTGACTACAAAGTCTGCACAGTGGCTTTGAATAAACACAGCCACAGAGAGTTTATAAAGTGGCAACATATGTGCCATAATGAGATAATTCCATGCTTATGTATTTCGCTGTCAGCATAGCAGTACATTAAAAAGAGCCACCTCAGCATGAGCCAGAGTAAATAAcacagtgaaaaaaataaagaaataaacaaaaaaaatcatgtgtGGTGGGCACTGCATGGTTGAACTAATTAGATTACAGAAGAGGAcggacacatttaaaaaaaaaaaaaaaaacaccacattgGATAGAAACCAAATCGAAGACACACAAATCTAAAACACATGAGCCATGTTTGAGATACAGCAAAGCGGGTTTCATGTGtagaaatctatttttttttcaacaattaaaaacatatgAAGACAATCCTACGTGGAAGAgctacaaaacagaaaacaggacGAACAACACGAGGGGTGGTGAGGCACATCAATCAGGCCAGTGGGTAACGGAAGGGCTGGGATCGAGGTGCATTCAGAGGGGCTGCTACTCTACGAGGAGGCTTTCATACTGGGAATGGGACGGGACGGGACATGGTGGACAGGGGTGACGAGACAGCTGGGACAGAGACACACTCCGGCTTGGGTGGAAATACCTTGGTTCCCTGCCAGTATGCCCAAATTACTGTCACAGCGCGTTTATTCCGCGCTTCTTGTTTTAGACGCCTCAGCTCCATCCGAGCCTGGTGGGACGTGGTGGGGCGTTCGGTAAAGGCAGGTTTCGA

Function

GO: NA

KEGG:

id description
ko04657 IL-17 signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU165524 True 5158 lncRNA 0.44 2 10147001 10152280

Neighbor

gene id symbol gene type direction distance location
LOC120570306 NA coding upstream 42834 10099932 ~ 10104167 (+)
fev fev,LOC102784253 coding upstream 192124 9949090 ~ 9954877 (+)
cryba2b cryba2,LOC106581834,LOC106586156 coding upstream 200300 9943512 ~ 9946701 (+)
fn1a LOC103365935 coding upstream 229375 9884821 ~ 9917626 (+)
LOC120569754 LOC102780892 coding upstream 299242 9842142 ~ 9847759 (+)
LOC120569327 LOC103358003,LOC100710305,LOC102781664,LOC101475894 coding downstream 58830 10211110 ~ 10217650 (+)
rabl3 rabl3,LOC102779363 coding downstream 977777 11130057 ~ 11134144 (+)
nxph2a nxph2,LOC101474521 coding downstream 1004310 11156590 ~ 11175940 (+)
LOC120569661 NA coding downstream 1392328 11544608 ~ 11546302 (+)
dars1 dars,LOC102778528 coding downstream 1398635 11550915 ~ 11581353 (+)
G122980 NA non-coding upstream 433363 9693295 ~ 9713638 (+)
G122979 LOC103367214,LOC104965381 non-coding upstream 467247 9675190 ~ 9679754 (+)
G122975 NA non-coding upstream 479242 9641610 ~ 9667759 (+)
G122970 NA non-coding upstream 650791 9488953 ~ 9496210 (+)
G122910 NA non-coding upstream 962847 9183875 ~ 9184154 (+)
LOC120569328 NA non-coding downstream 57003 10209283 ~ 10281869 (+)
LOC120570334 NA non-coding downstream 97896 10250176 ~ 10321796 (+)
G123118 NA non-coding downstream 477265 10629545 ~ 10629939 (+)
LOC120569520 NA non-coding downstream 503666 10655946 ~ 10658786 (+)
G123132 NA non-coding downstream 524228 10676508 ~ 10676745 (+)
umps umps other upstream 218110 9920624 ~ 9928891 (+)
G122846 NA other upstream 1350255 8795453 ~ 8796746 (+)
hdac4 LOC103356262 other upstream 1830308 8170700 ~ 8316693 (+)
G122588 NA other upstream 2997962 7146625 ~ 7149039 (+)
ybey ybey other upstream 4935099 5209102 ~ 5211902 (+)
lrp1bb lrp1b,LOC102779748 other downstream 183711 10335991 ~ 10618696 (+)
LOC120570060 NA other downstream 1099637 11251917 ~ 11260642 (+)
serp2 NA other downstream 1855377 12007657 ~ 12013200 (+)
G123539 sept10,LOC102785043,LOC103375466 other downstream 2897478 13049758 ~ 13279866 (+)
G123633 NA other downstream 3201026 13353306 ~ 13354085 (+)

Expression


Co-expression Network