Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120569328 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053123.1 |
| NCBI id | CM020920.1 |
| chromosome length | 39440604 |
| location | 10209283 ~ 10281869 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU165547 | True | 259 | lncRNA | 0.41 | 3 | 10209283 | 10281869 |
| TU165549 | False | 256 | lncRNA | 0.41 | 3 | 10209283 | 10260580 |
| XR_005640863.1 | False | 222 | lncRNA | 0.41 | 2 | 10209311 | 10210497 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120570306 | NA | coding | upstream | 105116 | 10099932 ~ 10104167 (+) |
| fev | fev,LOC102784253 | coding | upstream | 254406 | 9949090 ~ 9954877 (+) |
| cryba2b | cryba2,LOC106581834,LOC106586156 | coding | upstream | 262582 | 9943512 ~ 9946701 (+) |
| fn1a | LOC103365935 | coding | upstream | 291657 | 9884821 ~ 9917626 (+) |
| LOC120569754 | LOC102780892 | coding | upstream | 361524 | 9842142 ~ 9847759 (+) |
| rabl3 | rabl3,LOC102779363 | coding | downstream | 848188 | 11130057 ~ 11134144 (+) |
| nxph2a | nxph2,LOC101474521 | coding | downstream | 874721 | 11156590 ~ 11175940 (+) |
| LOC120569661 | NA | coding | downstream | 1262739 | 11544608 ~ 11546302 (+) |
| dars1 | dars,LOC102778528 | coding | downstream | 1269046 | 11550915 ~ 11581353 (+) |
| pnkd | pnkd,LOC100703611,LOC104967495 | coding | downstream | 1305139 | 11587008 ~ 11595507 (+) |
| G123074 | NA | non-coding | upstream | 24199 | 10141347 ~ 10185084 (+) |
| G123078 | NA | non-coding | upstream | 57003 | 10147001 ~ 10152280 (+) |
| G122980 | NA | non-coding | upstream | 495645 | 9693295 ~ 9713638 (+) |
| G122979 | LOC103367214,LOC104965381 | non-coding | upstream | 529529 | 9675190 ~ 9679754 (+) |
| G122975 | NA | non-coding | upstream | 541524 | 9641610 ~ 9667759 (+) |
| G123118 | NA | non-coding | downstream | 347676 | 10629545 ~ 10629939 (+) |
| LOC120569520 | NA | non-coding | downstream | 374077 | 10655946 ~ 10658786 (+) |
| G123132 | NA | non-coding | downstream | 394639 | 10676508 ~ 10676745 (+) |
| G123133 | NA | non-coding | downstream | 410396 | 10692265 ~ 10692469 (+) |
| G123148 | LOC105912973,LOC105900140,LOC105893694,LOC105893089,LOC105940532 | non-coding | downstream | 519620 | 10801489 ~ 10801853 (+) |
| umps | umps | other | upstream | 280392 | 9920624 ~ 9928891 (+) |
| G122846 | NA | other | upstream | 1412537 | 8795453 ~ 8796746 (+) |
| hdac4 | LOC103356262 | other | upstream | 1892590 | 8170700 ~ 8316693 (+) |
| G122588 | NA | other | upstream | 3060244 | 7146625 ~ 7149039 (+) |
| ybey | ybey | other | upstream | 4997381 | 5209102 ~ 5211902 (+) |
| lrp1bb | lrp1b,LOC102779748 | other | downstream | 54122 | 10335991 ~ 10618696 (+) |
| LOC120570060 | NA | other | downstream | 970048 | 11251917 ~ 11260642 (+) |
| serp2 | NA | other | downstream | 1725788 | 12007657 ~ 12013200 (+) |
| G123539 | sept10,LOC102785043,LOC103375466 | other | downstream | 2767889 | 13049758 ~ 13279866 (+) |
| G123633 | NA | other | downstream | 3071437 | 13353306 ~ 13354085 (+) |
