G123096 (LOC103358003,LOC101475894,LOC100710305,LOC104963614,LOC102781664,LOC101175694)


Basic Information

Item Value
gene id G123096
gene name LOC103358003,LOC101475894,LOC100710305,LOC104963614,LOC102781664,LOC101175694
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 10214055 ~ 10217650 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU165556
AACCATTAATTTCCCTTTATTTTAAACTGTATggtaaagggggaaaaaaaaatacaatgcttGCATGGTTCTGTTACACACGATATAGAGAACAATTAAAGTTCATTTTATGGGGCATTGCTGTTTGAAATGGCACCTCTCCATCACCAATAACGGAGACAGAATCTAAAAACTGGCAAACAATTCCAAGTTGTCACATAATTGGCAGAACTGTATAATGAGGTTACAAAAAACTGTTTGCCTTTGAGAGGACCAAGATATCATGGCTAAACAGATGGACCTCTGGCAAATAAGAGTGCCATGACTAAATGCAATAGCTGTAAAATATGCCTACAAACTGGCACATTTTAAAGGAAACAATCTGTCCAAAAAAGCCCCCTTTTTACATGAAAGGGGTTTCAATCTATTTAGCACTGTGACCGGCTCCTGAGGGAGTAAAGAGCACAAGTATTGAAACAACGGAAAACATGTTGATAATTAAAAGAATATTAAAGCCCTTACTTTACAGTTGAACTATATATTAGGAAGGAGGGAATAGAGAAGGAAACATCTAAATACAGACAGACTTCTGTACGTCCTTCTACTGCACCTGGTGCTATGTTGTATGTAAAAATACAAATCAAGATGGTAGGTTTAGCTAGAGGTCCTCAGtctgcttcttcttcctcaGACTCGGACtCTTCCTCTGCATTTTTGAGCCATTCTACAAACTTCTTCATCTGTTCAAGGAAAACGCTCTTTCCTTTGGCAACGTGGGTTTCGTTGTACCACTTCAGAATTGCCTCCTCACTCAAGACATTcgCTTTGTAGAGCAGCACAACAATTTTCTGGAAGGCCTTCATGAAGTGGATGTTGTCGTAACAGTACTCTTGGATCCTCAGCAGGAGAGTGAGTTCAGAGAGGCCCTGGGTGGTGAAAGCCTTCAACAGTGGGCTGTATTGCTTTAAAAGTTTGATGGCTTGTTCTGTGACCAGCTCCTCCTTCTTGTTCCACTCCACGGAGCTCATTACACTGGCCCAAATTAGTGCGATCATCGTCTGCTCCGAGATGTTGTTCTTCTTGATTTCCTCTCCGACGTAGGCGATGAACGTCTTTGAGGGGGTCCCCACGTGACATCTGCTCCTCAAGCTCTTTCTGCAGCTCCTTGCGGGCACCTATGGACTGCTGGTTTCTGGCAAAGTCCGAAAGCTCCTTCAGTCCGGCGTCTGAGAAGTACTTTGAGAAGTGCTCACAACTGCGCTTGTTGGC
>TU165557
AACCATTAATTTCCCTTTATTTTAAACTGTATggtaaagggggaaaaaaaaatacaatgcttGCATGGTTCTGTTACACACGATATAGAGAACAATTAAAGTTCATTTTATGGGGCATTGCTGTTTGAAATGGCACCTCTCCATCACCAATAACGGAGACAGAATCTAAAAACTGGCAAACAATTCCAAGTTGTCACATAATTGGCAGAACTGTATAATGAGGTTACAAAAAACTGTTTGCCTTTGAGAGGACCAAGATATCATGGCTAAACAGATGGACCTCTGGCAAATAAGAGTGCCATGACTAAATGCAATAGCTGTAAAATATGCCTACAAACTGGCACATTTTAAAGGAAACAATCTGTCCAAAAAAGCCCCCTTTTTACATGAAAGGGGTTTCAATCTATTTAGCACTGTGACCGGCTCCTGAGGGAGTAAAGAGCACAAGTATTGAAACAACGGAAAACATGTTGATAATTAAAAGAATATTAAAGCCCTTACTTTACAGTTGAACTATATATTAGGAAGGAGGGAATAGAGAAGGAAACATCTAAATACAGACAGACTTCTGTACGTCCTTCTACTGCACCTGGTGCTATGTTGTATGTAAAAATACAAATCAAGATGGTAGGTTTAGCTAGAGGTCCTCAGtctgcttcttcttcctcaGACTCGGACtCTTCCTCTGCATTTTTGAGCCATTCTACAAACTTCTTCATCTGTTCAAGGAAAACGCTCTTTCCTTTGGCAACGTGGGTTTCGTTGTACCACTTCAGAATTGCCTCCTCACTCAAGACATTcgCTTTGTAGAGCAGCACAACAATTTTCTGGAAGGCCTTCATGAAGTGGATGTTGTCGTAACAGTACTCTTGGATCCTCAGCAGGAGAGTGAGTTCAGAGAGGCCCTGGGTGGTGAAAGCCTTCAACAGTGGGCTGTATTGCTTTAAAAGTTTGATGGCTTGTTCTGTGACCAGCTCCTCCTTCTTGTTCCACTCCACGGAGCTCATTACACTGGCCCAAATTAGTGCGATCATCGTCTGCTCCGAGATGTTGTTCTTCTTGATTTCCTCTCCGACGTAGGCGATGATGTCTTTGAGGGGGTCCCCACGTGACATCTGCTCCTCAAGCTCTTTCTGCAGCTCCTTGCGGGCACCTATGGACTGCTGGTTTCTGGCAAAGTCCGAAAGCTCCTTCAGTCCGGCGTCTGAGAAGTACTTTGAGAAGTGCTCACAACTGCGCTTGTTGGC

Function

NR:

description
PREDICTED: basic leucine zipper and W2 domain-containing protein 1-A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165556 True 1248 lncRNA 0.43 5 10214055 10217650
TU165557 False 1247 lncRNA 0.43 5 10214055 10217650

Neighbor

gene id symbol gene type direction distance location
myo1b myo1b coding downstream 5893 10143283 ~ 10208162 (-)
LOC120570308 LOC104919611,LOC104963617 coding downstream 91439 10119132 ~ 10122616 (-)
cfap65 NA coding downstream 95294 10104650 ~ 10118761 (-)
wnt6b wnt6 coding downstream 129835 10058333 ~ 10084220 (-)
wnt10a wnt10a coding downstream 170666 10016813 ~ 10043389 (-)
LOC120570057 NA coding upstream 541532 10759182 ~ 10761321 (-)
LOC120570237 NA coding upstream 656449 10874099 ~ 10878969 (-)
ralba ralb,LOC103370956 coding upstream 684195 10901845 ~ 10915402 (-)
nepro NA coding upstream 703353 10921003 ~ 10925563 (-)
tex30 tex30 coding upstream 708908 10926558 ~ 10929023 (-)
G123036 cryba2,LOC106581834,LOC106586156 non-coding downstream 267471 9943488 ~ 9946584 (-)
G123029 LOC103365935,LOC103392484 non-coding downstream 303058 9910460 ~ 9910997 (-)
G122990 NA non-coding downstream 381865 9829431 ~ 9832190 (-)
G122986 NA non-coding downstream 389869 9823917 ~ 9824186 (-)
G122985 NA non-coding downstream 390461 9823184 ~ 9823594 (-)
G123107 NA non-coding upstream 263865 10481515 ~ 10488786 (-)
G123127 NA non-coding upstream 448607 10666257 ~ 10666555 (-)
G123128 NA non-coding upstream 449580 10667230 ~ 10668174 (-)
G123130 NA non-coding upstream 450697 10668347 ~ 10668634 (-)
G123131 NA non-coding upstream 454659 10672309 ~ 10672678 (-)
G122878 NA other downstream 1213932 8999462 ~ 9000123 (-)
ccnt2a ccnt2,ccnt2a,LOC104923135,LOC102200362 other downstream 1410951 8793621 ~ 8803104 (-)
traf3ip1 traf3ip1 other downstream 1765625 8399585 ~ 8448430 (-)
tmeff2a tmeff2 other downstream 2896423 7181931 ~ 7317632 (-)
pcbp3 pcbp3,LOC100710924,LOC107660579,LOC103138153 other downstream 3342843 6782446 ~ 6871212 (-)
stxbp5l stxbp5l other upstream 722403 10940053 ~ 11094619 (-)
thsd7ba NA other upstream 1062960 11280610 ~ 11467939 (-)
LOC120570668 LOC103354235,LOC105936145,LOC100692075,LOC108240393,LOC104918665 other upstream 2014770 12232420 ~ 12245005 (-)
G123481 LOC106675207,LOC106674584,LOC106676400,LOC106674915,LOC106675345,LOC106676354,LOC106674636 other upstream 2401703 12619353 ~ 12619815 (-)
ikzf2 ikzf2 other upstream 3958164 14175814 ~ 14201729 (-)

Expression


Co-expression Network