G123148 (LOC105912973,LOC105900140,LOC105893694,LOC105893089,LOC105940532)


Basic Information

Item Value
gene id G123148
gene name LOC105912973,LOC105900140,LOC105893694,LOC105893089,LOC105940532
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 10801489 ~ 10801853 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU165623
CAGAGTTGGACATCCTCAAAGTAGGCCTTAACAAGGGTTGTGAGAGCTGCTGGAACCCTGAAGTAGTCAAAGGCTGTCCACAGGAGGGTGTGAGGTACTGAACCAAAAGCGTTCGCGAGATCCAGGAATACCACGTGAAGATCTGTTCCCTCCTTTTTGGCGACCTGGATCTGATGCCAGATGACACTAGCATGTTCTACACAACCAGAAAAGCCTGAGATGCCTGCTTTCTGAATTGACGTGTCAATCAGGTTGTTTCTTTGCAGGTATTCTGCCAATCTGTGAGCGACCACACTGAAGAAGATTTTTCCCTCGACGTTTAGAAGGCTGATCTGGCGGAACTGCCCAATCACTGATGAGCCCTT

Function

NR:

description
PREDICTED: uncharacterized protein LOC105912973

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165623 True 365 lncRNA 0.49 1 10801489 10801853

Neighbor

gene id symbol gene type direction distance location
LOC120569327 LOC103358003,LOC100710305,LOC102781664,LOC101475894 coding upstream 583839 10211110 ~ 10217650 (+)
LOC120570306 NA coding upstream 697322 10099932 ~ 10104167 (+)
fev fev,LOC102784253 coding upstream 846612 9949090 ~ 9954877 (+)
cryba2b cryba2,LOC106581834,LOC106586156 coding upstream 854788 9943512 ~ 9946701 (+)
fn1a LOC103365935 coding upstream 883863 9884821 ~ 9917626 (+)
rabl3 rabl3,LOC102779363 coding downstream 328204 11130057 ~ 11134144 (+)
nxph2a nxph2,LOC101474521 coding downstream 354737 11156590 ~ 11175940 (+)
LOC120569661 NA coding downstream 742755 11544608 ~ 11546302 (+)
dars1 dars,LOC102778528 coding downstream 749062 11550915 ~ 11581353 (+)
pnkd pnkd,LOC100703611,LOC104967495 coding downstream 785155 11587008 ~ 11595507 (+)
G123133 NA non-coding upstream 109020 10692265 ~ 10692469 (+)
G123132 NA non-coding upstream 124744 10676508 ~ 10676745 (+)
LOC120569520 NA non-coding upstream 142703 10655946 ~ 10658786 (+)
G123118 NA non-coding upstream 171550 10629545 ~ 10629939 (+)
LOC120570334 NA non-coding upstream 479693 10250176 ~ 10321796 (+)
G123172 nepro non-coding downstream 117193 10919046 ~ 10922301 (+)
G123181 kdelc1 non-coding downstream 129829 10931682 ~ 10933355 (+)
G123184 NA non-coding downstream 138199 10940052 ~ 10942903 (+)
G123279 NA non-coding downstream 607817 11409670 ~ 11425251 (+)
LOC120570367 NA non-coding downstream 816743 11618596 ~ 11634792 (+)
lrp1bb lrp1b,LOC102779748 other upstream 182793 10335991 ~ 10618696 (+)
umps umps other upstream 872598 9920624 ~ 9928891 (+)
G122846 NA other upstream 2004743 8795453 ~ 8796746 (+)
hdac4 LOC103356262 other upstream 2484796 8170700 ~ 8316693 (+)
G122588 NA other upstream 3652450 7146625 ~ 7149039 (+)
LOC120570060 NA other downstream 450064 11251917 ~ 11260642 (+)
serp2 NA other downstream 1205804 12007657 ~ 12013200 (+)
G123539 sept10,LOC102785043,LOC103375466 other downstream 2247905 13049758 ~ 13279866 (+)
G123633 NA other downstream 2551453 13353306 ~ 13354085 (+)
cps1 cps1 other downstream 2833701 13635554 ~ 13696334 (+)

Expression


Co-expression Network