LOC120570060


Basic Information

Item Value
gene id LOC120570060
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 11251917 ~ 11260642 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU165794
gtgtcTACATCTGAAGGAGGGCCGACTAAAGAGGAAGGAGCTCATCTACATCCAGATGGATTTCTGACACACAACCAACCATTAGCTCTTTCCGTTAAACAATAAGGCTGTAATTATAATATTACATTATGTAGGGCCTAACTCTCaacatgaaaagaccaaaacaacaATGTGTTAGTCTCTTCATACtttgacttcctgtctgtggcCCTCAGCATCATTGGTTTCTACTGAAGATGTATTCTTTAAAAACACCTAGAATATACAGTTTAATTTGAAAACTAGACAGAGAAAGCAGGAGTACAGGAATCCAAGCAGCCGTTGCAATTTGAAACCATGGCAACATTATGTTTGTGAACGAGTATTGACATTTAGTATACTTTTGCCATATCCTGTCTGAATTTCGGCAATCGAGAAAAGCTTTAAGTGCAGTTAATTGTTTCTGCAAAAATGTATCGTCAAGTTTGTTAAATACTGACATGCTAGCGGCTTCAACAGAAAGCTGCAACCATCTTGCTTGTCTTCGGAAATGCATCAGCAGCGCTCTTCTGTACAGTCTTCTTTTCAAACACACACTATATGAGAAGAATGGTTGTGATTGACCTGTCAAATCTGAAGTTGCTGGAAATCTGTCTGAACAATAAGGGGGACTAGACACATTTGCCAGAGCAAATAGAACATGAGCTTTTAGATTAATCTGGTTCATAGGCAAGGCTAATGAAACATCTGCAGCCTGTTGCACCAGCTATGTGTACGTTCTCTCTTAAGTTAGGGTGTAAAGTCATTAAATGATACATTTAAATTAGTTAGTTTGATACTAAACTTGTTTCGATGTTTGGTTGCACTACGGAGACGTAAGGTTAATCCTAGTTACTCTGGCATAAAGGCCACGCTAATCAAAATGTTGTCGCAGAGAATGACATTCTCACTTCCAGTGACCAATCAGGGAAAAGCACAATTATTGATGCAGTGTATTAATGTCCTGTCAGGGTTGTGTCTTGGGCCCaatcaaagccggtctacgaaAAGCCTTTTCACTCCCTATTTaaccccattgtaccgaatttggttgcaatTCCATCAGATTTCCACTGGGGGTGACCGCAGgagagtgcaaaatgaatgggactctatggagctagacggctaaatttatctctttcgcctgattgccgttgagaaatctcagatttgattgtagtttcaCATggaagttcaacatggattataggttcgaaagttgaatgaacaaGTTACTTACGTCTTTtcgatttcttacaggttgagtcgttgttgcccataacacgctagcattctgctaatgaatgctgattggtcagtgaaggagtgattaaGACCAGAGATCCTGCTTGACGGCATCCAAAgcggaaccagaatgtcagagagaatatttcggtgtggtctttaaaacattagcaaacctctttctagcacgtgtattgacacggagagcctaacctgtcagatgtgttgtcgatgcctcgagagaacaaaggaagcgactcagagcttgccatAAAGCAGTAtgtctggccgtatatgtgtatgacgtcattaatattttaaaaggctttttagaacaataAAGCGActcagcagtgtgtattttctttgcctcccctttcgaatgcaaca
>XM_039818288.1
ACTTTTATAATATAGTGTAGGAGGTTATTGTGAAGTGAATCTCAGTTTCTGTGTTCTGTAGGCTATGTGCATTTAACCAcctcgtgatttattcaacaCTCCATCGAACGTAAAACACTGACTACTGTAGGTTCACTGCCCTTGGGAAAAGCATGTTCATCACTGTGTCAGCGGCAGCTACCGCTTACGGACTCCAGGCTGAAGGAAAACACAACTCAAcagAGACTGTCAGGTTGGTGGGAGGAGATAGCCGCTGTGCAGGATCACTGGAGCTGAAACATCAGGGAGACTGGAAACAAGTGAGTGACACTCACTGGAACCTGAAGAAAGCAGCGGTTGCCTGTAAAGAGTTGGACTGTGGCTCTGCTGTTTCTGTAGGATGGAGAGAAGAGTCCTCAGACAGATCTGTGTGGAAGCTCAAATATGACTGTGTTCAGTCTGGATCTGCTCTGAGGGAGTGTGCAAGATCAGATTCCTCGTCCACCATTGTGGATCTCAACTGTTCAGAATCTGTCAGGCTGGTGAATGGGACTAGTCTGTGCTCAGGCAGACTGGAGGTGAAGACTAACAAGTCTCCCCAGCGGTGGTCCTCGGTGTGTGAAGATGACTTTGACCATCAGGATGCAGAGGTGGTCTGTAGGGAGCTCGGCTGTGGGGCTCCTTCAGTCCTTCAGGGGGTGCACTATGGAGAAGTGGAAGCCCCAATGTGGACCAAAGAGTTCCAGTGTGGAGGCCAGGAGTCTGCTCTCCTGGACTGTGGAAGCTCAGGCTCAGAAAGAAACGTCACCTGCTCACCTGGCAAAGTAGTTGgactcacctgctcagAGCCTGTTAGGTTGGTGGGAGGAGACAGTCGCTGTGCAGGAATAGTGGAGCTGAAACATCTGGACTGGAGACCAGTGATTAACTATGACATCACCCCAGATACAGCAGCTGCCATCTGTAAAGAACTGGACTGTGGCTCTGCTGTTTCTGTAGATGAGAAAGAGGAGTCTTCATACAGAGATATGTGGAGGGTCAGCTCTGACTGTGTTCAGTCTGGAACTGTTCTGAGAGACTGTGTAACACCATGGCACTTTCACATCGCCCTAAATCTCACCTGCTCAGATCTGTTTCAGCCCAACATCTCTGTGTCCTCGTCCATGGACGGCGCCTCTGAGGCCCAGCAGCAACGCTTTCGGGTGTTCAGGGGCTCCACCTTCAACGTCAGCTGTTCCATTCAGCCACAGTACCCAGGAGGCTCCTTTCAGCTCACCTTCACCTCCTTAAACTCAGCACACAACTACACCCAACCAGCTGTTAATCACTctgcccacttcctgtttcctgctgcACAGGCCGTCCACCACGGAAATTACAGCTGTGTTTATCACGTCTCTGTTTTATCTCATAACTTCTCCTCCGAGAGCCgtctgctctctctcactgtctcagACCTACTGTTTCCACCCAACATCTCCTTGGACGGGGACTCCGAGGCCCAGCAGCAAGGGTTTCGGGTGTTCAGGGGCTCCATCTTCAACATCAGCTGCTTCATTCAGCCACAGTACCCAGGAGGCTCCTTTCAGCTCACCTTTACCTCTACCAACTCAGCACACAATTACACCATGCCTGCTGTCAATCACTCggcccacttcctgtttcctgctgcAGAGCCCGCCCACCAAGGAAGCTACAGCTGTGTTTATCACGTCTCTGTTTTATCTCATAACTTCTCCTCTGAGAGCCGTCTGCTCTCTCTCACTATCATAGTCCAAAGAAACCACGCTTGTTCGGAAGTTATTAGCAATCCGACACCTCTTATCATCAGAGCGGTCATCCTGCCGCTGACTCTGCTGTTGGTGAATGCTGCCCTTTATCTTTACTGTAAGGAGGGCCGACTAAAGAGGAAGGAGCTCATCTACATCCAGATGGATTTCTGA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU165794 False 1656 lncRNA 0.41 1 11258987 11260642
XM_039818288.1 True 1922 mRNA 0.51 11 11251917 11259053

Neighbor

gene id symbol gene type direction distance location
nxph2a nxph2,LOC101474521 coding upstream 75977 11156590 ~ 11175940 (+)
rabl3 rabl3,LOC102779363 coding upstream 117773 11130057 ~ 11134144 (+)
LOC120569327 LOC103358003,LOC100710305,LOC102781664,LOC101475894 coding upstream 1034267 10211110 ~ 10217650 (+)
LOC120570306 NA coding upstream 1147750 10099932 ~ 10104167 (+)
fev fev,LOC102784253 coding upstream 1297040 9949090 ~ 9954877 (+)
LOC120569661 NA coding downstream 283966 11544608 ~ 11546302 (+)
dars1 dars,LOC102778528 coding downstream 290273 11550915 ~ 11581353 (+)
pnkd pnkd,LOC100703611,LOC104967495 coding downstream 326366 11587008 ~ 11595507 (+)
gmppaa gmppa coding downstream 337232 11597874 ~ 11608077 (+)
asic4a asic4,LOC102777753 coding downstream 482693 11743335 ~ 11838604 (+)
G123184 NA non-coding upstream 309014 10940052 ~ 10942903 (+)
G123181 kdelc1 non-coding upstream 318562 10931682 ~ 10933355 (+)
G123172 nepro non-coding upstream 329616 10919046 ~ 10922301 (+)
G123148 LOC105912973,LOC105900140,LOC105893694,LOC105893089,LOC105940532 non-coding upstream 450064 10801489 ~ 10801853 (+)
G123133 NA non-coding upstream 559448 10692265 ~ 10692469 (+)
G123279 NA non-coding downstream 149028 11409670 ~ 11425251 (+)
LOC120570367 NA non-coding downstream 357954 11618596 ~ 11634792 (+)
G123322 NA non-coding downstream 582738 11843380 ~ 11845465 (+)
G123323 NA non-coding downstream 585031 11845673 ~ 11846949 (+)
G123324 NA non-coding downstream 586415 11847057 ~ 11847386 (+)
lrp1bb lrp1b,LOC102779748 other upstream 633221 10335991 ~ 10618696 (+)
umps umps other upstream 1323026 9920624 ~ 9928891 (+)
G122846 NA other upstream 2455171 8795453 ~ 8796746 (+)
hdac4 LOC103356262 other upstream 2935224 8170700 ~ 8316693 (+)
G122588 NA other upstream 4102878 7146625 ~ 7149039 (+)
serp2 NA other downstream 747015 12007657 ~ 12013200 (+)
G123539 sept10,LOC102785043,LOC103375466 other downstream 1789116 13049758 ~ 13279866 (+)
G123633 NA other downstream 2092664 13353306 ~ 13354085 (+)
cps1 cps1 other downstream 2374912 13635554 ~ 13696334 (+)
G123742 NA other downstream 2972690 14233332 ~ 14234070 (+)

Expression


Co-expression Network