G123323


Basic Information

Item Value
gene id G123323
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 11845673 ~ 11846949 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU165876
attggaaagtttgtaagtacaccaggagacaagttataattgaggtaagtttggagacactaccttatgtaatcattaaattaataaatatttttgttgcatctctttttggtgttgtagtttgaAGACGGTCCccaagcactcgtcttactgccgatagaagtagcagcagagagcagaagccatcTGGCaagtgtttattaaacaaactcctggtgtacttacaaactttccaatgccttgttttatgagtacagaacctatttgtactactgtagaagtttggtatcatttcgggcattattagtggagGCATTTACAAGATACACCTTTGGTTCCATTAGCACCTGCACTAAGCCATTTGGTTGATAGTGCTAACTCACCCAATGTAACACCaagggaaaaaagcttctggggggtggggaggggtgtttggctcgaggtcatggtgcaaaagaccctagggtgaaattactccaaaccatcactttaacattaaATCAAATGGCATTCTAGAAATGTGAAAACGTGGCTGCTACTACTTCTGAACCCACTGAAAAGGAACAAACTACTGTAGCTTTTTACCACTTTCAACTCATTGCTTTGGTTAAACTGATTCAATCCTCCCAAACAAAACTATAAGCAGCTGTGCCCAGCACTTTATCTCAAATGTGTTGATACTTCCCCCAACTCAAAGTGGTTGAAGATATTTCTTCCAGGATAAAAACCAAACAGGATAAAAATCCAAGTGAATATTGGAATTACCCTGAACATGTGGAGAACAAGACGACTCTAACGGGTTACCTATGTAGCCCTGTGTTGCATGGATGTGTAGTGAACACCTTAAACATAACAACTGGATGCGCCAGCGCTACATCAAGGCTCTGCTGCTTTAAATCtctgccacctagtggtccgaAATTGCTTAACGCAGCTTTCAGAATCAGAGTAGCAAAAACATTTGGTTCTAGCAACTCATCTGTACGGACAAGTATTGTAAACGTTTAAGGAAAGGTTTCGTTAAGAATGTACTACATTCATTTTTCCAAACTAGCTAAAAACTAACAAACCAAATAATTCTCGATGCACACTGAAAGATAGAGAATGTCAGGCAGGGTCACACATGTAACCTCAGCCCCCAGACATGGGTTGTCCCAAATTCTAGCTTGCATCCAGAGCTTATtacaacagacacacagcttttaaaaaggaacacgctgacttattgggactttagcttattcacagtaagccccagagttagacaagtcgataca

Function

GO: NA

KEGG:

id description
ko04216 Ferroptosis
ko04978 Mineral absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU165876 True 1277 lncRNA 0.40 1 11845673 11846949

Neighbor

gene id symbol gene type direction distance location
asic4a asic4,LOC102777753 coding upstream 7069 11743335 ~ 11838604 (+)
gmppaa gmppa coding upstream 237596 11597874 ~ 11608077 (+)
pnkd pnkd,LOC100703611,LOC104967495 coding upstream 250166 11587008 ~ 11595507 (+)
dars1 dars,LOC102778528 coding upstream 264320 11550915 ~ 11581353 (+)
LOC120569661 NA coding upstream 299371 11544608 ~ 11546302 (+)
LOC120570467 pdxk,LOC103353978,LOC100702179,LOC102214826 coding downstream 11503 11858452 ~ 11867638 (+)
agpat3 agpat3 coding downstream 22288 11869237 ~ 11899174 (+)
LOC120569371 NA coding downstream 53759 11900708 ~ 11906825 (+)
LOC120569768 NA coding downstream 102165 11949114 ~ 11980836 (+)
LOC120570655 LOC103353985 coding downstream 213721 12060670 ~ 12113263 (+)
G123322 NA non-coding upstream 208 11843380 ~ 11845465 (+)
LOC120570367 NA non-coding upstream 210881 11618596 ~ 11634792 (+)
G123279 NA non-coding upstream 420422 11409670 ~ 11425251 (+)
G123184 NA non-coding upstream 902770 10940052 ~ 10942903 (+)
G123181 kdelc1 non-coding upstream 912318 10931682 ~ 10933355 (+)
G123324 NA non-coding downstream 108 11847057 ~ 11847386 (+)
G123374 NA non-coding downstream 167823 12014772 ~ 12016505 (+)
G123384 NA non-coding downstream 267098 12114047 ~ 12213222 (+)
G123386 NA non-coding downstream 271432 12118381 ~ 12178012 (+)
G123391 NA non-coding downstream 275616 12122565 ~ 12122871 (+)
LOC120570060 NA other upstream 585031 11251917 ~ 11260642 (+)
lrp1bb lrp1b,LOC102779748 other upstream 1226977 10335991 ~ 10618696 (+)
umps umps other upstream 1916782 9920624 ~ 9928891 (+)
G122846 NA other upstream 3048927 8795453 ~ 8796746 (+)
hdac4 LOC103356262 other upstream 3528980 8170700 ~ 8316693 (+)
serp2 NA other downstream 160708 12007657 ~ 12013200 (+)
G123539 sept10,LOC102785043,LOC103375466 other downstream 1202809 13049758 ~ 13279866 (+)
G123633 NA other downstream 1506357 13353306 ~ 13354085 (+)
cps1 cps1 other downstream 1788605 13635554 ~ 13696334 (+)
G123742 NA other downstream 2386383 14233332 ~ 14234070 (+)

Expression


Co-expression Network