G123341


Basic Information

Item Value
gene id G123341
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 11845610 ~ 11847383 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU165908
ataaaacaaggcattggaaagtttgtaagtacaccaggagtttgtttaataaacacttGCCAgatggcttctgctctctgctgctacttctatcggcagtaagacgagtgcttggGGACCGTCTtcaaactacaacaccaaaaagagatgcaacaaaaatatttattaatttaatgattacataaggtagtgtctccaaacttacctcaattataacttgtctcctggtgtacttacaaactttccaatgccttgttttatgagtacagaacctatttgtactactattGAAGTTTGGTACCATTCCGGgaa
>TU165909
aataagtgacaaaataacgccaacatgttcctgtttacatgtattgatttgtacaaataacaaggtcactaggcttttactatctagtaattgttgactctattactccaactctgagcgaactctctgctcctcaccacagggcttcaggtgctgcgagcaaatcactccgcagAAGTTGCAGAGctttgcctttctgagaatatagttcccagtttgtatacagtTAGACTGCTGTGTCTCATATGACCTTATTTGTACACCCTCTGACTATACAAATTGCAACATGTAAAccggaacatgttggcgtt
>TU165913
aataagtgacaaaataacgccaacatgttcctgtttacatgtattgatttgtacaaataacaaggtcactaggcttttactatctagtaattgttgactctattactccaactctgagcgaactctctgctcctcaccacagggcttcaggtgctgcgagcaaatcactccgcagAAGTTGCAGAGctttgcctttctgagaatatagttcccagtttgtatacagtTAGACTGCTGTGTCTCATATGACCTTATTTGTACACCCTCTGACTATACAAATTGCAACATGTAAAccggaacatgttggcgttattttgtcacttattcagagcagtaggctagttggaacctgttacctccaggatctgtgctaggcttagctagcgctgggggcgtcagacagagttacgacacgcacggagatgagaagggtatgtatcgacttgtctaactctggggcttactgtgaataagctaaagtcccaataagtcagcgtgttcctttttaaaagctgtgtgtctgttgtaATAAGCTCTGGATGCAAGCTAGAATTTGGGACAACCCATGTCTGGGGGCTGAGGTTACATGTGTGACCCTGCCTGACATTCTCTATCTTTCAGTGTGCATCGAGAATTATTTGGTTTGTTAGTTTTTAGCTAGTTTGGAAAAATGAATGTAGTACATTCTTAACGAAACCTTTCCTTAAACGTTTACAATACTTGTCCGTACAGATGAGTTGCTAGAACCAAATGTTTTTGCTACTCTGATTCTGAAAGCTGCGTTAAGCAATTtcggaccactaggtggcagaGATTTAAAGCAGCAGAGCCTTGATGTAGCGCTGGCGCATCCAGTTGTTATGTTTAAGGTGTTCACTACACATCCATGCAACACAGGGCTACATAGGTAACCCGTTAGAGTCGTCTTGTTCTCCACATGTTCAGGGTAATTCCAATATTCACTTGGATTTTTATCCTGTTTGGTTTTTATCCTGGAAGAAATATCTTCAACCACTTTGAGTTGGGGGAAGTATCAACACATTTGAGATAAAGTGCTGGGCACAGCTGCTTATAGTTTTGTTTGGGAGGATTGAATCAGTTTAACCAAAGCAATGAGTTGAAAGTGGTAAAAAGCTACAGTAGTTTGTTCCTTTTCAGTGGGTTCAGAAGTAGTAGCAGCCACGTTTTCACATTTCTAGAATGCCATTTGATttaatgttaaagtgatggtttggagtaatttcaccctagggtcttttgcaccatgacctcgagccaaacacccctccccaccccccagaagcttttttcccttGGTGTTACATTGGGTG
>TU165914
aataagtcagcgtgttcctttttaaaagctgtgtgtctgttgtaATAAGCTCTGGATGCAAGCTAGAATTTGGGACAACCCATGTCTGGGGGCTGAGGTTACATGTGTGACCCTGCCTGACATTCTCTATCTTTCAGTGTGCATCGAGAATTATTTGGTTTGTTAGTTTTTAGCTAGTTTGGAAAAATGAATGTAGTACATTCTTAACGAAACCTTTCCTTAAACGTTTACAATACTTGTCCGTACAGATGAGTTGCTAGAACCAAATGTTTTTGCTACTCTGATTCTGAAAGCTGCGTTAAGCAATTtcggaccactaggtggcagaGATTTAAAGCAGCAGAGCCTTGATGTAGCGCTGGCGCATCCAGTTGTTATGTTTAAGGTGTTCACTACACATCCATGCAACACAGGGCTACATAGGTAACCCGTTAGAGTCGTCTTGTTCTCCACATGTTCAGGGTAATTCCAATATTCACTTGGATTTTTATCCTGTTTGGTTTTTATCCTGGAAGAAATATCTTCAACCACTTTGAGTTGGGGGAAGTATCAACACATTTGAGATAAAGTGCTGGGCACAGCTGCTTATAGTTTTGTTTGGGAGGATTGAATCAGTTTAACCAAAGCAATGAGTTGAAAGTGGTAAAAAGCTACAGTAGTTTGTTCCTTTTCAGTGGGTTCAGAAGTAGTAGCAGCCACGTTTTCACATTTCTAGAATGCCATTTGATttaatgttaaagtgatggtttggagtaatttcaccctagggtcttttgcaccatgacctcgagccaaacacccctccccaccccccagaagcttttttcccttGGTGTTACATTGGGTGAGTTAGCACTATCAACCAAATGGCTTAGTGCAGGTGCTAATGGAACCAAAGGTGTATCTTGTAAATGCctccactaataatgcccgaaatgataccaaacttctacagtagtacaaataggttctgtactcataaaacaaggcattggaaagtttgtaagtacaccaggagtttgtttaataaacacttGCCAgatggcttctgctctctgctgctacttctatcggcagtaagacgagtgcttggGGACCGTCTtcaaactacaacaccaaaaagagatgcaacaaaaatatttattaatttaatgattacataaggtagtgtctccaaacttacctcaattataacttgtctcctggtgtacttacaaactttccaatgccttgttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165908 False 312 lncRNA 0.37 1 11845610 11845921
TU165909 False 311 lncRNA 0.41 1 11847073 11847383
TU165913 True 1331 lncRNA 0.42 1 11846053 11847383
TU165914 False 1236 lncRNA 0.40 1 11845664 11846899

Neighbor

gene id symbol gene type direction distance location
LOC120569666 LOC101066695,LOC103353973,LOC100702988,LOC104967496 coding downstream 258537 11581030 ~ 11587073 (-)
LOC120570648 hnmt,LOC107099306 coding downstream 568904 11270196 ~ 11276706 (-)
LOC120570649 NA coding downstream 576758 11262358 ~ 11268852 (-)
LOC120569285 LOC104963990 coding downstream 608851 11228607 ~ 11236759 (-)
spopla spopl,LOC102233870 coding downstream 648673 11184045 ~ 11196937 (-)
chpfa chpf coding upstream 106 11847489 ~ 11853239 (-)
LOC120570301 LOC104966043,LOC103353981 coding upstream 80618 11928001 ~ 11931566 (-)
LOC120569817 tsc22d1,LOC104964899,LOC108240410 coding upstream 167390 12014773 ~ 12023501 (-)
LOC120569816 LOC103392286 coding upstream 199123 12046506 ~ 12050719 (-)
kctd4 kctd4,LOC104957956 coding upstream 237640 12085023 ~ 12087014 (-)
G123340 NA non-coding downstream 138 11843330 ~ 11845472 (-)
G123310 NA non-coding downstream 246108 11597946 ~ 11599502 (-)
LOC120569667 NA non-coding downstream 248904 11593181 ~ 11596706 (-)
G123290 NA non-coding downstream 296906 11548503 ~ 11548704 (-)
LOC120569662 NA non-coding downstream 301092 11540827 ~ 11544518 (-)
G123348 agpat3 non-coding upstream 29956 11877339 ~ 11899170 (-)
G123356 NA non-coding upstream 106540 11953923 ~ 11956600 (-)
G123369 NA non-coding upstream 157492 12004875 ~ 12006402 (-)
G123480 NA non-coding upstream 771653 12619036 ~ 12619284 (-)
LOC120569379 NA non-coding upstream 1039086 12886469 ~ 12889147 (-)
thsd7ba NA other downstream 377671 11280610 ~ 11467939 (-)
stxbp5l stxbp5l other downstream 750991 10940053 ~ 11094619 (-)
G122878 NA other downstream 2845487 8999462 ~ 9000123 (-)
ccnt2a ccnt2,ccnt2a,LOC104923135,LOC102200362 other downstream 3042506 8793621 ~ 8803104 (-)
traf3ip1 traf3ip1 other downstream 3397180 8399585 ~ 8448430 (-)
LOC120570668 LOC103354235,LOC105936145,LOC100692075,LOC108240393,LOC104918665 other upstream 385037 12232420 ~ 12245005 (-)
G123481 LOC106675207,LOC106674584,LOC106676400,LOC106674915,LOC106675345,LOC106676354,LOC106674636 other upstream 771970 12619353 ~ 12619815 (-)
ikzf2 ikzf2 other upstream 2328431 14175814 ~ 14201729 (-)
G123886 NA other upstream 2937178 14784561 ~ 14794497 (-)
G123960 NA other upstream 3137102 14984485 ~ 14993789 (-)

Expression


Co-expression Network