G123348 (agpat3)


Basic Information

Item Value
gene id G123348
gene name agpat3
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 11877339 ~ 11899170 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU165924
TTTGTGATTACATCCTTTAATATTCTCAAGTGTTTAAATTgaagaaaacataaaaatagcCTTAGAAAACAAAACCTGACACAAGAGGTGCAACTAACTCAATTATCTTTAAGAtttaaaaatgccattaagTGGTGTCAATCTGTAAGTTTGTTATTTGTTTACATTGAGGACCTCAGAAAACACAACCACAAGTTACGGTTATATTTCTTTACTGAATAAAAAACATCCAGTGTAGAAAAGTGTCTAAACGTCTCAGCATCCTTTCTGCTTTGGAATATGAGGTTTACTGAATGACAGGAAGAGTTTGACTGCATTGGTAACTGATCAGATCTCTTGAGGTTAAAGATAACAGGCCAAGATAATAAAGcttttaacaaatattaaaacaaCTCTAAGTATCTTCTTGTAAAAATGTGACTTGATTACAAACAGAACTGTGACAGCAGACTTTATCAATTCTCTTTAGTGGTTATTGTTTAAACTTTAGAACAAGCTGTTTGGCAACTAACCCCAGCAACTTGCTTGCTATACCAAAGGAcgtttttcaattttcaatcCTTCACTACCACAGGGACTCCGTTAGCTTctacattttcacacaaaagTTAAGCAGCACGGTCTATTAAGGCTTGCATGAATCTGTCTGGGTTGAGATAACTCTACAGAGAgatgaagtacacacacacattgctgcGGAGTGAAAAattaaaaccaacaaaatataTGATTAACGCTACATGTGGCACggaaggaggggtgggggtggggtacCCTCCATGTCTTGCTACCATTGTTTGCATTTTGGACCAGGAAACGTGGCTTTAAACACTGGAAGAGATGCACTCAAGTACTGCAGCAGCCAAAGTTTATTTCTTgcagttaaaaacaaaccaactcTGAGATGACCGATTTTAACCAGTGAAATGTATGGAGCTGTGCACCTACAATGGCTAGGACATCCAGAGAAAAGCTGCCTGCACACAATGTGAAAGCAGCTTTCTTTAACTAACGACTATGTACAGGTACAAGGACGCCTTTAACAAAGTAACAACTTGCTAGCTTTCCactttaaaagacaaaataaatgtttttcaattaatcATTTGCTTTGGTAATCAAACCAAACGAAAGCACACTGCCCCCTTTATGCACTGTAATGGGAGGAAGAGCACGAATATTGAAAAAACATAACGCAGACGTATAAGGGGGATAGAAGGTGGGTGCTGTTTTAAAGGGGTGGCGAATAAGCAATCCCTTGCCTGAGCTAGCTTGATTTAAGGCAAAGCTTGAAAAATCACTACTACAGTCTATATGTGGACAGAAAAATAATGTGCTAACAGCTGAGAGGCTACATGAAGACAGTTGGTGCATTGTAACTGTCAACACTGGCAtcagaggagggggagggaggtggAGTAGCTTGAACAGCTTCAGTGTTTGGACTAGGATTGCTGGTTGAATTAACATCacatttgggggggggggtcagaaAGCCTTCAACCACGTTTTATAAATGAACAATAATATGCAAGCAAATTCCTATTGGTGGAAAACGAGTGAAAATAGGAATAGAAACTGGGAAAATGGCTTAAAATGTCAGGATGAATCCGTGGGTATTGGTGCTATAGGCTAAAAATGAGACCTGTAACAGGTGGTAAGTGTTCTTGATGAGGTCAGAAAGCCCTTGCTGTAGTTTAGCAGACACCAGCCTCTCCAAGCCATGTTGTTAAGGGGTCAGTTCACAAAGACCACGAGACAATATCTAGCCGTGGAGATGATGTGGGATTTATATTTTGAGATCTCTGCTCCTAACCTATTACAATAGAGGTGAACTGAATGTCATTGGTGGTGctcaaattatttaaaatatttgagaAATTAAAGAGCAATGTctctttgcagaaaaaaaaaaaaaatgtgcctACTACTTGGATAATCCAATGTGGCAAGTTCTCACTATTGTTTTTACAATCGACATATAGTTACTGATGAAAATTGTCATAAATTATCCAGAGCAACAGAGACATTTATTCTGGATAGCGCACtgctgttatgttttttttaaatgtacttttacaATGATTTGAGCACCATGGACAACATAGAGTGGCAGTAGAAGTGTCAGACCCATGGCACATACAAACCCAAACTATCCACGAGGCTAAATACTTTGACGTTAAATGGTAAATGTTTAttgatttgggtgaactgaccctttacaTTAAGGAAACCAGGCTGGGCCTCAAGGCACCGGTTCCCATTACAAGTCCCACTtgtgaaagtgaaaaaaaggaaGGGAGATGTCTTGCATGTTACAGACTGCTGTTGCAGAAACGCACTGCCCCTGGATAGTTAAGATTAAACAGATCAGATATGGACCGGCTTGTGTTCTGTTGCAAAAAGAATGAGCACGCCAACACCCCCTGATTGGCCGATGACTGACAGGAAGTGGAGGTAGGTAAAGCAGAGCAGGAAATGAGCTGACTGGCTGTCCATGTGACCTCAGACAGGTTAGAAGCTTAACCTCGGGTGTTACCGGGATTTAATTGGACTTGGATGTAGACAGTGGGTCGCTAGCTGGATTAAGAAAGATGCAGGGGAATACAGTACTGCATCTCCCCCTCCTTACGTTCTGTGTTACACCAGAGAGCTTAAACCCCAGACATTCCATGTTTTCACTCACTCTAGTGCCATTAGTATTTCTAAATCTGGTCTCTATTATATTTTCTGCAGCTGCGTCTCCTCCCTGGCCTGCCAACTGACTTAACAGTAGGAGGAGAATGGAGTTGGGTAGGGGCGAGAAACCGCAGGGTGACCGTACAGAAACGGCCGTACACggagggggtggggtggggggggtctgACACACTTTAATTTTGTTTCTTGGCCTCTGGGTTGCCGTAACTGGAGCCTGTTTTCTTCACCTCGGTGACCCCTATGAGGCGGCGGATAGCTATCGAGGCTATGATGAGGAAGATGATAAAGCCAATGATGAGGAGGGGGGAGCCACTGACGACCACGCCACATGCAAAGTTGATGAGGGGCGAAAGCAGCAGGGTGGCCCAAAACAGGAAGTTCAGCAGCGTCCATGGCCTGCGAGGTGGAGTTATTGTGGGTCCGGGGAACTTGCCTTCCTTTTTGTAGAATTCCTGTAAGGCATCCTTCTCTTGGTAGAGCTTGTGCAGCCAGATGGCACACTCCTTCTCATCATCTGGTATATCCTCCACAGGAAACCGCctcacactcaagtcagCTTTGTATTTCTTGCCATTGACGATGCCCAGGAGAGTGGGAGTTTGGTTGTCTTTGAAGTTAAGAGTCACATCGTACACAGCAGAtGTGCCCTTAAGACATTGCAGTGTGGTGGTGAATCCTTTGGTTCGGGGTAGTAGGTGGTATTTGAGCTTGGGCAGGCCTTTACTCTCTGCAACCTGCATACTGATTTGGTGCTTTGTCTCTGTAAAGCGGGTCCCCTCGCAATACAGCAAAAACTGTGGAGGCAGATGAGCTGTGttatacatatacacaat
>TU165925
TTTGTGATTACATCCTTTAATATTCTCAAGTGTTTAAATTgaagaaaacataaaaatagcCTTAGAAAACAAAACCTGACACAAGAGGTGCAACTAACTCAATTATCTTTAAGAtttaaaaatgccattaagTGGTGTCAATCTGTAAGTTTGTTATTTGTTTACATTGAGGACCTCAGAAAACACAACCACAAGTTACGGTTATATTTCTTTACTGAATAAAAAACATCCAGTGTAGAAAAGTGTCTAAACGTCTCAGCATCCTTTCTGCTTTGGAATATGAGGTTTACTGAATGACAGGAAGAGTTTGACTGCATTGGTAACTGATCAGATCTCTTGAGGTTAAAGATAACAGGCCAAGATAATAAAGcttttaacaaatattaaaacaaCTCTAAGTATCTTCTTGTAAAAATGTGACTTGATTACAAACAGAACTGTGACAGCAGACTTTATCAATTCTCTTTAGTGGTTATTGTTTAAACTTTAGAACAAGCTGTTTGGCAACTAACCCCAGCAACTTGCTTGCTATACCAAAGGAcgtttttcaattttcaatcCTTCACTACCACAGGGACTCCGTTAGCTTctacattttcacacaaaagTTAAGCAGCACGGTCTATTAAGGCTTGCATGAATCTGTCTGGGTTGAGATAACTCTACAGAGAgatgaagtacacacacacattgctgcGGAGTGAAAAattaaaaccaacaaaatataTGATTAACGCTACATGTGGCACggaaggaggggtgggggtggggtacCCTCCATGTCTTGCTACCATTGTTTGCATTTTGGACCAGGAAACGTGGCTTTAAACACTGGAAGAGATGCACTCAAGTACTGCAGCAGCCAAAGTTTATTTCTTgcagttaaaaacaaaccaactcTGAGATGACCGATTTTAACCAGTGAAATGTATGGAGCTGTGCACCTACAATGGCTAGGACATCCAGAGAAAAGCTGCCTGCACACAATGTGAAAGCAGCTTTCTTTAACTAACGACTATGTACAGGTACAAGGACGCCTTTAACAAAGTAACAACTTGCTAGCTTTCCactttaaaagacaaaataaatgtttttcaattaatcATTTGCTTTGGTAATCAAACCAAACGAAAGCACACTGCCCCCTTTATGCACTGTAATGGGAGGAAGAGCACGAATATTGAAAAAACATAACGCAGACGTATAAGGGGGATAGAAGGTGGGTGCTGTTTTAAAGGGGTGGCGAATAAGCAATCCCTTGCCTGAGCTAGCTTGATTTAAGGCAAAGCTTGAAAAATCACTACTACAGTCTATATGTGGACAGAAAAATAATGTGCTAACAGCTGAGAGGCTACATGAAGACAGTTGGTGCATTGTAACTGTCAACACTGGCAtcagaggagggggagggaggtggAGTAGCTTGAACAGCTTCAGTGTTTGGACTAGGATTGCTGGTTGAATTAACATCacatttgggggggggggtcagaaAGCCTTCAACCACGTTTTATAAATGAACAATAATATGCAAGCAAATTCCTATTGGTGGAAAACGAGTGAAAATAGGAATAGAAACTGGGAAAATGGCTTAAAATGTCAGGATGAATCCGTGGGTATTGGTGCTATAGGCTAAAAATGAGACCTGTAACAGGTGGTAAGTGTTCTTGATGAGGTCAGAAAGCCCTTGCTGTAGTTTAGCAGACACCAGCCTCTCCAAGCCATGTTGTTAAGGGGTCAGTTCACAAAGACCACGAGACAATATCTAGCCGTGGAGATGATGTGGGATTTATATTTTGAGATCTCTGCTCCTAACCTATTACAATAGAGGTGAACTGAATGTCATTGGTGGTGctcaaattatttaaaatatttgagaAATTAAAGAGCAATGTctctttgcagaaaaaaaaaaaaaatgtgcctACTACTTGGATAATCCAATGTGGCAAGTTCTCACTATTGTTTTTACAATCGACATATAGTTACTGATGAAAATTGTCATAAATTATCCAGAGCAACAGAGACATTTATTCTGGATAGCGCACtgctgttatgttttttttaaatgtacttttacaATGATTTGAGCACCATGGACAACATAGAGTGGCAGTAGAAGTGTCAGACCCATGGCACATACAAACCCAAACTATCCACGAGGCTAAATACTTTGACGTTAAATGGTAAATGTTTAttgatttgggtgaactgaccctttacaTTAAGGAAACCAGGCTGGGCCTCAAGGCACCGGTTCCCATTACAAGTCCCACTtgtgaaagtgaaaaaaaggaaGGGAGATGTCTTGCATGTTACAGACTGCTGTTGCAGAAACGCACTGCCCCTGGATAGTTAAGATTAAACAGATCAGATATGGACCGGCTTGTGTTCTGTTGCAAAAAGAATGAGCACGCCAACACCCCCTGATTGGCCGATGACTGACAGGAAGTGGAGGTAGGTAAAGCAGAGCAGGAAATGAGCTGACTGGCTGTCCATGTGACCTCAGACAGGTTAGAAGCTTAACCTCGGGTGTTACCGGGATTTAATTGGACTTGGATGTAGACAGTGGGTCGCTAGCTGGATTAAGAAAGATGCAGGGGAATACAGTACTGCATCTCCCCCTCCTTACGTTCTGTGTTACACCAGAGAGCTTAAACCCCAGACATTCCATGTTTTCACTCACTCTAGTGCCATTAGTATTTCTAAATCTGGTCTCTATTATATTTTCTGCAGCTGCGTCTCCTCCCTGGCCTGCCAACTGACTTAACAGTAGGAGGAGAATGGAGTTGGGTAGGGGCGAGAAACCGCAGGGTGACCGTACAGAAACGGCCGTACACggagggggggggggggg
>TU165926
TTTGTGATTACATCCTTTAATATTCTCAAGTGTTTAAATTgaagaaaacataaaaatagcCTTAGAAAACAAAACCTGACACAAGAGGTGCAACTAACTCAATTATCTTTAAGAtttaaaaatgccattaagTGGTGTCAATCTGTAAGTTTGTTATTTGTTTACATTGAGGACCTCAGAAAACACAACCACAAGTTACGGTTATATTTCTTTACTGAATAAAAAACATCCAGTGTAGAAAAGTGTCTAAACGTCTCAGCATCCTTTCTGCTTTGGAATATGAGGTTTACTGAATGACAGGAAGAGTTTGACTGCATTGGTAACTGATCAGATCTCTTGAGGTTAAAGATAACAGGCCAAGATAATAAAGcttttaacaaatattaaaacaaCTCTAAGTATCTTCTTGTAAAAATGTGACTTGATTACAAACAGAACTGTGACAGCAGACTTTATCAATTCTCTTTAGTGGTTATTGTTTAAACTTTAGAACAAGCTGTTTGGCAACTAACCCCAGCAACTTGCTTGCTATACCAAAGGAcgtttttcaattttcaatcCTTCACTACCACAGGGACTCCGTTAGCTTctacattttcacacaaaagTTAAGCAGCACGGTCTATTAAGGCTTGCATGAATCTGTCTGGGTTGAGATAACTCTACAGAGAgatgaagtacacacacacattgctgcGGAGTGAAAAattaaaaccaacaaaatataTGATTAACGCTACATGTGGCACggaaggagggccgggggcggggacaaaagtccgctctcaagtcggacagttttccagctgattccagcagccttcaggctgaacaggaagtgacagaaacactgtggtccgattccgatttaataaaatgttatcagacccatatatcagctcctacacagtctccagttgtttttattatgacagagtagctgtcaaaattctctacatgcgatctgttgctgattttaattaacacactgtagatgatccgtaatctgaacagatt

Function

symbol description
agpat3 Predicted to enable 1-acylglycerol-3-phosphate O-acyltransferase activity. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Is expressed in central nervous system; digestive system; optic vesicle; pronephric duct; and visual system. Orthologous to human AGPAT3 (1-acylglycerol-3-phosphate O-acyltransferase 3).

NR:

description
hyaluronan synthase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165924 True 3533 lncRNA 0.43 5 11891199 11899170
TU165925 False 2857 lncRNA 0.41 2 11882964 11899170
TU165926 False 1017 lncRNA 0.37 2 11877339 11899170

Neighbor

gene id symbol gene type direction distance location
chpfa chpf coding downstream 24100 11847489 ~ 11853239 (-)
LOC120569666 LOC101066695,LOC103353973,LOC100702988,LOC104967496 coding downstream 290266 11581030 ~ 11587073 (-)
LOC120570648 hnmt,LOC107099306 coding downstream 600633 11270196 ~ 11276706 (-)
LOC120570649 NA coding downstream 608487 11262358 ~ 11268852 (-)
LOC120569285 LOC104963990 coding downstream 640580 11228607 ~ 11236759 (-)
LOC120570301 LOC104966043,LOC103353981 coding upstream 28831 11928001 ~ 11931566 (-)
LOC120569817 tsc22d1,LOC104964899,LOC108240410 coding upstream 115603 12014773 ~ 12023501 (-)
LOC120569816 LOC103392286 coding upstream 147336 12046506 ~ 12050719 (-)
kctd4 kctd4,LOC104957956 coding upstream 185853 12085023 ~ 12087014 (-)
tpt1 NA coding upstream 214882 12114052 ~ 12120122 (-)
G123341 NA non-coding downstream 29956 11845610 ~ 11847383 (-)
G123340 NA non-coding downstream 31867 11843330 ~ 11845472 (-)
G123310 NA non-coding downstream 277837 11597946 ~ 11599502 (-)
LOC120569667 NA non-coding downstream 280633 11593181 ~ 11596706 (-)
G123290 NA non-coding downstream 328635 11548503 ~ 11548704 (-)
G123356 NA non-coding upstream 54753 11953923 ~ 11956600 (-)
G123369 NA non-coding upstream 105705 12004875 ~ 12006402 (-)
G123480 NA non-coding upstream 719866 12619036 ~ 12619284 (-)
LOC120569379 NA non-coding upstream 987299 12886469 ~ 12889147 (-)
G123580 NA non-coding upstream 1117181 13016351 ~ 13016738 (-)
thsd7ba NA other downstream 409400 11280610 ~ 11467939 (-)
stxbp5l stxbp5l other downstream 782720 10940053 ~ 11094619 (-)
G122878 NA other downstream 2877216 8999462 ~ 9000123 (-)
ccnt2a ccnt2,ccnt2a,LOC104923135,LOC102200362 other downstream 3074235 8793621 ~ 8803104 (-)
traf3ip1 traf3ip1 other downstream 3428909 8399585 ~ 8448430 (-)
LOC120570668 LOC103354235,LOC105936145,LOC100692075,LOC108240393,LOC104918665 other upstream 333250 12232420 ~ 12245005 (-)
G123481 LOC106675207,LOC106674584,LOC106676400,LOC106674915,LOC106675345,LOC106676354,LOC106674636 other upstream 720183 12619353 ~ 12619815 (-)
ikzf2 ikzf2 other upstream 2276644 14175814 ~ 14201729 (-)
G123886 NA other upstream 2885391 14784561 ~ 14794497 (-)
G123960 NA other upstream 3085315 14984485 ~ 14993789 (-)

Expression


Co-expression Network