G123439


Basic Information

Item Value
gene id G123439
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 12232683 ~ 12236291 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU166040
gctaaataatataatttattcaaCTGACCTCACATATGTTTACAACTATACTCTTATAGACActgcatgaataaataaatagctgTATTTCCCTATCAACAAACATCATTTTCAATGCTGCATTTAAAAGTAGACTAATTTGTTCCAATGCTTTTGGTATATACATTTATCACACAAAAATACATCATCATTGCAATTTACGACATTTATCCACAAATGTGCCAGTTCAACGGCTGATAGAATCTTTTGTGTGTTCAGGTTTGTGAATGAACCTAAGCTACGGCACACTCGTTATGAAGCTTATTTGACGAGGAGGAAAGTTTACATTCACATTTAAGTCCAATGAGATTGCCTGACACTTTGCATAGCATCAGACCAGCAGTCACCCCATTCAGTTTGAAGCTGACGTCGCCTTGGTGGCAAATCATAAATCCCTCAGCTGTTATTAATGCTTTAGGGACGAGACAGGATCAGGTTGGGATTTAGTGTGTCTTACTGTATCTCAGCAGATATGGCTGCATGCCGGGATCAAGTCCCCTTTACTCTAAAGACTAACTATAAGGCCAATATGCCACcttaaaggATTGCCACCAAATTGCTTGAAAAGACCAAAATCAACAATGAATCGAtcctactaacaagtattgtcTGAGCAGCCAAAGCCTGATATTAGCTTGTTTTTTCTGTGCTATAGAACTCTTCTGTTGTCCAATAAACTAGtgaaaacacatcagtgagccacactCATTGACATATTCCTCCATTAAGATTACCATTAGCACTTTCAGTTGTTTAAAGTTCTATACCTACTGCTGCCATAAATACCCAATAGGATGTccaatgtgtattaatccacatggaaatagtccccaacaaatgcaccatTTAGTCCTGTTTGAGTAGTGTTTTCTGCAAACTACAGTGCCCCAACTGTGTTAGGAAATTGTTCCTTAAAAGAAAATGACACTATATATTAATGATCTCCTTTTAAAGATGTATGTCTTCAgtcagaatatatatatatatatatatatatatatatatatatatagatatagatatggTCGGGAAGTCAGAGAATACTGTAAGACAGACTGACACATTGTTAGTTTTGGTCTTAATTgttgacaataaataaaatacagaatGTCACCAGCCTGATCCTTTAACTGAAAAATGATTTCTAAATAAGTGGTCACTTTTTGCCAGTGTTTCCAAACCCAGTCATTGTCCATGGTTGACCTTTGCATTAAGGCGAGTCCatagataaaataaaacaccaacAAACCACAACAATTCTGACAGGGAATTGTTAGACAACATAAACACAGAGAAGTCAACTGGACAACAGTAACACGTAACACAAGCCAAAAACATCACTTCATAAAGTGACTCCTTTACACGATTCGGGCCATACAGAGAAGCAGCGCGCCAGGTAGTTTGAAACAGCCAGACCTGGGGAAATGTGAGGACTGACATTGGAGAATTTGTGTGAGGGTGCTCTATCAGTAACTTTCATCACTGTATATGACACACTGTCAAACAAACCCTTAAAAACTGCAGTTTCAACCTTTATTAATCAAATGTCCGCAGGGCTAATCGACTTGGGATTGGATCAATAATGACCGGTGCTACCGACACCATCCTGGGAGAAACAATCATTTCCTGTCTCCGCTAACCTGCTGTGGCCGGCCAGTCAATACAGGTTTAGGAAGAGCAAACAAACCATCATAGGCACACACACTGTTTCAAATGAGCTTTTGTGTGATCATTTTAAAGGATCATATCAGTCCTTTAAAATGATACCAAGGAAGTATACTGTTTATTAATGGCaatcattttcaaaacttaCTGTAGTGTTTTAGATTTCTGAATTGTCATACTTTCCATGCTGCCATTGGGttccattcatttatttatgaaaaTGATCAAATGTGCTTTAATTGTTGTCAATGTTACTGTAATGTGGTAATGCTGTTGTAAATGCATATTAATTCAAAGAAGTACGATGAAGATGTACGACACAATCATAAGTTTGCCAAACAATAAGATTTCAAATTGATTTTCACAACGCATGGGAATGAATGAAAGCCAGTGGCTGCTTAGAAGGTACACAGGAAAAACAGGTTTCTAATGGATATTTATCAGGGTGGTGTGTAATGAAATCTGAGGTTCTTAAGGAATTACATCCATACATGAGGATTCTGCAGGTTCCTCTGCACGTTTTACGTCCAGTGCAAAAAGTGTAGAGTTCAAGATAGTGGAGGATGTTTAATGTGTTTGACTTTGACAACAAAGAGTCATGTGTGTGtcccatttttatgtttaaaaatgaccaatatatttttttagagctgatataatcaatattttctatTAAATAAAATAGATCAAAGATTGATTAAATGACTAATGACTATCAAATGACAGATAATTATCACCCACAGTAGAGTCCTTCAGGCCATTGTTTTGGGGTTTTCGGGCCCACAACTTAAGTTTTTTTGGTTTACTCTTACTGCTCTCATCAACCTCGTTGCTGCCCCTTGAGGCAGCTCTTTACAACAAAACGCTTTGATAAACCCGCTGTACACTACCTGTCATAGTaagcgactagctggtgaacatagtggagtatTTAGCAGCTAAGGAGCCACATATTTAACTCAGGAGttagtggagaccaaaacagagctaaaaggagagtgaatattggacttgaTTATACCGCAGCCATTTTGTCGTTGCAACATGGGGATATTGTTGGATttcaaacataaatacattttttaaagactGAACGTAGTCTGCAGAATCATCCAATATCAACCTTCTGTTTGGCGAGTCAAGGGTTAAGTAATATGACGGCATGTGGTTCTTAATTCAACACGTACTGTATCTGGGATTAGCGATTATGAGAGGAAATTTAAGAGCAAGGTGAGCATGAAACAAAATTagcaaaaaaatcaaaaaatcaaTGACAGTAACTTGCAAATTCAGTTCAATGTATCTACGTATCTATACAACATAGATCCTACAAATATTATTGCTCTATTAATACATTTACTTTACGCAAACTTACAACTCAAAGCCTGAAAAGGTTCTGGAGCATTCACTGCTTTGTTGAATGTGTACACATGTGCATgttcatcaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactgctattACATGGACACGCATGACAGGGACACAACTCCTTGGTTAGATATTGCACTATTCTCATTACCCCCAGCAAACCGTTGTAGACGTCAATGTCCACTGCATTCACTCTTTGTTTTCCCCTGAAAGTCCTTCTGATCACTGTCGTAGcacttaaattaaaatagatTCACAGAAtcacgatttaaaaaaaagcatgagTATGGTATGCTTGACACAGCTGATTGACAATCAACGTCCTGGAATCTTAAAAAAGAAGGAGGCACCATATAATCAGCATAAAACAAACTTGTGGAGTCACTCGGAAGCCACAGCAGATTTCTGTTGATTTGGCTTCCGGTGCGGCAGTAGCAAGTTTCCTGAAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166040 True 3579 lncRNA 0.38 2 12232683 12236291

Neighbor

gene id symbol gene type direction distance location
tmem223 NA coding upstream 47077 12184466 ~ 12185606 (+)
LOC120570655 LOC103353985 coding upstream 119420 12060670 ~ 12113263 (+)
LOC120569768 NA coding upstream 251847 11949114 ~ 11980836 (+)
LOC120569371 NA coding upstream 325858 11900708 ~ 11906825 (+)
agpat3 agpat3 coding upstream 333509 11869237 ~ 11899174 (+)
LOC120570413 fbxo47,LOC102789634 coding downstream 16813 12253104 ~ 12261257 (+)
stx19 stx19 coding downstream 389683 12625974 ~ 12632469 (+)
zgc:152951 LOC103359009,LOC100698576 coding downstream 700684 12936975 ~ 12947546 (+)
pou1f1 pou1f1 coding downstream 801533 13037824 ~ 13048644 (+)
vgll3 vgll3 coding downstream 840447 13076738 ~ 13079755 (+)
G123384 NA non-coding upstream 19461 12114047 ~ 12213222 (+)
G123386 NA non-coding upstream 54671 12118381 ~ 12178012 (+)
G123395 ranbp2 non-coding upstream 101454 12126331 ~ 12131229 (+)
G123391 NA non-coding upstream 109812 12122565 ~ 12122871 (+)
G123374 NA non-coding upstream 216178 12014772 ~ 12016505 (+)
G123453 arl6,LOC105936143,LOC102790207,LOC101465764,LOC106903726 non-coding downstream 25476 12261767 ~ 12264331 (+)
LOC120569536 NA non-coding downstream 177261 12413552 ~ 12415344 (+)
G123479 NA non-coding downstream 367105 12603396 ~ 12603607 (+)
G123491 NA non-coding downstream 427710 12664001 ~ 12664471 (+)
G123493 NA non-coding downstream 439635 12675926 ~ 12676126 (+)
serp2 NA other upstream 219483 12007657 ~ 12013200 (+)
LOC120570060 NA other upstream 972041 11251917 ~ 11260642 (+)
lrp1bb lrp1b,LOC102779748 other upstream 1613987 10335991 ~ 10618696 (+)
umps umps other upstream 2303792 9920624 ~ 9928891 (+)
G122846 NA other upstream 3435937 8795453 ~ 8796746 (+)
G123539 sept10,LOC102785043,LOC103375466 other downstream 813467 13049758 ~ 13279866 (+)
G123633 NA other downstream 1117015 13353306 ~ 13354085 (+)
cps1 cps1 other downstream 1399263 13635554 ~ 13696334 (+)
G123742 NA other downstream 1997041 14233332 ~ 14234070 (+)
si:dkeyp-118h9.7 LOC102200331 other downstream 2740304 14976595 ~ 14993834 (+)

Expression


Co-expression Network