LOC120569306


Basic Information

Item Value
gene id LOC120569306
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 15243198 ~ 15249829 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU166818
CCTGCTCCTAGGGTCCACATCTCCTGGTTTGGGTttgTAAAcactttattggcattttaacctgtgtgtgtgtaagcctcTGCTCAAGAGATCAAGAAATACAAATTGGTGATGAGACACTCCGTTGACACAACCCTTGTCAAGGACAAAATGAAGGCAACATTTGAGAAAAGACAAAAGTTTGTTCAAGACCCAGCAAGGTTTCCACTGTCCTAGACCTTTTTCCAAGATTTCTGGACACATCAGGCTTGCCAAGGGCAAGAAGACTGCAAAGATTAGCACAACAGAAGCTGCTGGCCGCCTGATGAAGTTTCTCAAGGTGGGGAGAAGCATGGACACATTCCTCAAGGAAACAGAACCTCCAACATTAGCTGCAGGCTCAAACTCAACATTGCTTAGGAAACCTGAATCAACACAGTGTGCTTGCGATAAGTGCAGCTTGTAAAAACAGTGtgcaaaaacaaacatccaGCCTCTCCACAGAGCAAACGCAAAGACCTTCCTGGGTACAATCCATGCTGAAGCTTCAAATGTCTAACAGTGAACAATTTCTGTGGTGTACCTTGCAAATGAAACATGTAAACATTTGAAGTCAGAAATTAGTTCCTcttcaaactgaactgaaagaaGTCTAATTTCCTTCACCTGAGGACTCTTCTTCACACTGCCAACCTCAATGCCATACACGATTGTCTGGATGAATGTGTAGAAGTTGCACAGCGCATCGTTAAAGGACACAGCAAAAGCAAAATGGGCCTTGAAGAGCTCGTCAAAGGCCGCAACTCCGGTCTGAATCTTACATGGAATGGCCTTTTGGTCCAGGATGATGTAAAAGTTCTGGATGCTGTTTTTTTACTTCCTCCAACACAGGAGAAAGGGCTGAGCTCTTTTCCACCACACCTCGGAAGGGTTCAGTTTTTCAGGTTACAGGTGACAACTTGGCTATACATAGCCTTTTTGGATTTGTCAAATCATTCAGTGCAAAGTAGTGCTGTCGATTTTGTTCAACTGAAAAGGGAGAGATGCAATCagttttcagtgaagatcatcCAACTTTAAATCTGCGTTCTAAAGCCCTTCATTCAGAACACTGTGCTGCCATTCAACAAACTCCTGCTTTGTCCTCAACATTTGGTGTGAAACTAACCTGTCCACTCACTTCCCTCCAGCTGTTCCATACTTTAGACATCTGATTTTTGATCATCTTAagctttttaaatctatttcCAGACCAATTTGATTCCAAAGCACCATCTAATGATACATTTCCCACGGTGTATTAGGAAGATTGGGTGCATTAGCTTTCAGAGTCtgtaaaaaaactttaaaaacattcCAAAAAAACTAGCAAAGAGATATCAGAATCAGTTGGCTTTTCATTTTGagaacttttattttcaaagatTTCAATTTGGCCCCATTACTGAAGTCTTGGTCAGCAGTTTGGAGGGCAGTGAGGCGCTGAATTAAACTTTTGATTTGTCTGTTTTTCCCACAACTTCCTGGGTTCCTGGTTGTCCACAGTGACTGTAAAAAGAAGGTTGTCCACAACATTTTACACCTTTAGAGTAAATTTTGTTACACCTATTAGTGTTACTAAATTGGAGTCCAGTGTAGTCTGGTAGCTTAGAATTTGTAACACTGACACTATTCTAGGGTAATAACACTACTCTGTGTTGGCCAGTGTCTTTCAACTCGTTACAGGGTTGAATCAACTCCAGGTGAGTATAAAAATATTAACACTTTCAAAATTGTTAATTTAACACTGAAAAGAGTGGACGCATATAGACACTTTCCTAGTGTTAAATTTAACACTCAGTTAATTTAACACTGGTGATTTGGCATTCTACTACTACTGCATGGTGCAAAAGTAAAGAATGTTTAAACTCTTCCCATATTGGCATTAGGTAGACATACTTGAAAAAAGGATCTAAATAATTCAAATATGCAAATTGGTTCCTTATTATACTGTTGTACTGATTTATTTCAAGGtatttaaatagcaaatataTTACATTAAGCAGAGTGGTCTCTGTGCTCTACTACAGGGtaaacgttttttaaacaaagagatggagcagggactcCCTGCTAttaatattgtataaaatgaagttgcatattaaactgtgcCTAAAATAACGTGTATGGCATTataagcctttatacatacctctttaagtgcatagaatactaagctattaaaatattaattgtcggcatgattttataaatcatcttttaatgttacactTACATGttgcacagtgaatccttagaattaactatctgtggatggctgtcttagtgactaccttatcTATatgccagtaagcctatcatcagtgggaatttatatgtgctaataatatgttggattcatgttaagacatttacatttttggaaaaacttaaaaaaattaacaatttggaggcccccctgcagtgactctgaggatcccctaggggccccggacccccggttgaagatctctgctctgcTGTTTACAGAGACATGCATGAGAAAGACAGAATACTCCTGCTTGTAGTTGTAATTAAATTATTGCAACTGTAAATCAGACTATATAGCAATGTTGTAGCAAAGTTCATACTAAGAGTTGCCTAGGTCCAGACCTATAAATCGCTTCccctcttaggcctacatgccaTTTATGTGTGAATTCAAAACTGGAAGTCCTCAAGAGCAGTACACCAATGAGCCACCAGGGGGAGAACACAAGCTACAAAAAGATGTCACTGGGAATCATTTCTATTACTCATTATGTTTTTAACAAGTGAAGTATAGAATGGCTTTCATCTTTTCAATTGGTTCCTCGCTTGTAAAAGTCTATTTATGATCCCAGATAAAGTAATGACTAGAAGTAATGGGTGGTTTCAGATTTATAGGCCATGGTGTGGTGTtgtggtggctcagtggttatcATCTCACACCTGTCATTTCATCTCACCTCAATGAAAATGAGCAGCACTTCAAAAAGACTTCTTTTTATCTTCAGAGGTAGGCTACAGGAGAAGTTGCAGGGAGTGAATGCGGTGCTTTCTGCCCGTCTGATTCAGACTTCAGATGACCTGCTTGAGGAGCACATTAGCTGTATGCACTTTACCCAGTTTCAAAGCTTCAGTGTTGTATATAGTCTGCAAAAATCCTTTTTGGGTCTATTTGCTGCAGATGAAAGCAATGTGGACAATGGTTTTATTACACTGTGCAACCAACCAGGAGAAAGACAACCTGTCTGAAATCACTGCATATGAATTTCATACATCCAGGCTTGCAAAGTGCCTCAATTATTTGCTTTTGCAGAGATGCTATGAGTATTAAAAGCTTTAACATTTGATAGAAAATCAGATTTGTGAGTTTCATGAAAgactttttatgttttcttcAAGCTAAAATTTAGTAGTTCT
>TU166819
CCTGCTCCTAGGGTCCACATCTCCTGGTTTGGGTttgTAAAcactttattggcattttaacctgtgtgtgtgtaagcctcTGCTCAAGAGATCAAGAAATACAAATTGGTGATGAGACACTCCGTTGACACAACCCTTGTCAAGGACAAAATGAAGGCAACATTTGAGAAAAGACAAAAGTTTGTTCAAGACCCAGCAAGGTTTCCACTGTCCTAGACCTTTTTCCAAGATTTCTGGACACATCAGGCTTGCCAAGGGCAAGAAGACTGCAAAGATTAGCACAACAGAAGCTGCTGGCCGCCTGATGAAGTTTCTCAAGGTGGGGAGAAGCATGGACACATTCCTCAAGGAAACAGAACCTCCAACATTAGCTGCAGGCTCAAACTCAACATTGCTTAGGAAACCTGAATCAACACAGTGTGCTTGCGATAAGTGCAGCTTGTAAAAACAGTGtgcaaaaacaaacatccaGCCTCTCCACAGAGCAAACGCAAAGACCTTCCTGGGTACAATCCATGCTGAAGCTTCAAATGTCTAACAGTGAACAATTTCTGTGGTGTACCTTGCAAATGAAACATGTAAACATTTGAAGTCAGAAATTAGTTCCTcttcaaactgaactgaaagaaGTCTAATTTCCTTCACCTGAGGACTCTTCTTCACACTGCCAACCTCAATGCCATACACGATTGTCTGGATGAATGTGTAGAAGTTGCACAGCGCATCGTTAAAGGACACAGCAAAAGCAAAATGGGCCTTGAAGAGCTCGTCAAAGGCCGCAACTCCGGTCTGAATCTTACATGGAATGGCCTTTTGGTCCAGGATGATGTAAAAGTTCTGGATGCTGTTTTTTTACTTCCTCCAACACAGGAGAAAGGGCTGAGCTCTTTTCCACCACACCTCGGAAGGGTTCAGTTTTTCAGGTTACAGGTGACAACTTGGCTATACATAGCCTTTTTGGATTTGTCAAATCATTCAGTGCAAAGTAGTGCTGTCGATTTTGTTCAACTGAAAAGGGAGAGATGCAATCagttttcagtgaagatcatcCAACTTTAAATCTGCGTTCTAAAGCCCTTCATTCAGAACACTGTGCTGCCATTCAACAAACTCCTGCTTTGTCCTCAACATTTGGTGTGAAACTAACCTGTCCACTCACTTCCCTCCAGCTGTTCCATACTTTAGACATCTGATTTTTGATCATCTTAagctttttaaatctatttcCAGACCAATTTGATTCCAAAGCACCATCTAATGATACATTTCCCACGGTGTATTAGGAAGATTGGGTGCATTAGCTTTCAGAGTCtgtaaaaaaactttaaaaacattcCAAAAAAACTAGCAAAGAGATATCAGAATCAGTTGGCTTTTCATTTTGagaacttttattttcaaagatTTCAATTTGGCCCCATTACTGAAGTCTTGGTCAGCAGTTTGGAGGGCAGTGAGGCGCTGAATTAAACTTTTGATTTGTCTGTTTTTCCCACAACTTCCTGGGTTCCTGGTTGTCCACAGTGACTGTAAAAAGAAGGTTGTCCACAACATTTTACACCTTTAGAGTAAATTTTGTTACACCTATTAGTGTTACTAAATTGGAGTCCAGTGTAGTCTGGTAGCTTAGAATTTGTAACACTGACACTATTCTAGGGTAATAACACTACTCTGTGTTGGCCAGTGTCTTTCAACTCGTTACAGGGTTGAATCAACTCCAGGTGAGTATAAAAATATTAACAAAATGGAAAGCACACCTTCAAAGGGTTGGAGTATTGCATTAAAAAGATGACCTTAAGATCAGAGATAACTTTTCATTTCAACATGCATTAGCCTATATTATTTCCAAAGCATGAACTATATATAATCTTAACATGTGCAACTGAGCTGGGTTAAATGTTGAAACTGCTGGAGCAGTGCTCCATATTAATTCTGAAAGACGATAATAAAAC
>XR_005640858.1
TCTCCTGCTCCTAGGGTCCACATCTCCTGGTTTGGGTttgTAAAcactttattggcattttaacctgtgtgtgtgtaagcctcTGCTCAAGAGATCAAGAAATACAAATTGGTGATGAGACACTCCGTTGACACAACCCTTGTCAAGGACAAAATGAAGGCAACATTTGAGAAAAGACAAAAGTTTGTTCAAGACCCAGCAAGGTTTCCACTGTCCTAGACCTTTTTCCAAGATTTCTGGACACATCAGGCTTGCCAAGGGCAAGAAGACTGCAAAGATTAGCACAACAGAAGCTGCTGGCCGCCTGATGAAGTTTCTCAAGGTGGGGAGAAGCATGGACACATTCCTCAAGGAAACAGAACCTCCAACATTAGCTGCAGGCTCAAACTCAACATTGCTTAGGAAACCTGAATCAACACAGTGTGCTTGCGATAAGTGCAGCTTGTAAAAACAGTGtgcaaaaacaaacatccaGCCTCTCCACAGAGCAAACGCAAAGACCTTCCTGGGTACAATCCATGCTGAAGCTTCAAATGTCTAACAGTGAACAATTTCTGTGGTGTACCTTGCAAATGAAACATGTAAACATTTGAAGTCAGAAATTAGTTCCTcttcaaactgaactgaaagaaGTCTAATTTCCTTCACCTGAGGACTCTTCTTCACACTGCCAACCTCAATGCCATACACGATTGTCTGGATGAATGTGTAGAAGTTGCACAGCGCATCGTTAAAGGACACAGCAAAAGCAAAATGGGCCTTGAAGAGCTCGTCAAAGGCCGCAACTCCGGTCTGAATCTTACATGGAATGGCCTTTTGGTCCAGGATGATGTAAAAGTTCTGGATGCTGTTTTTTTACTTCCTCCAACACAGGAGAAAGGGCTGAGCTCTTTTCCACCACACCTCGGAAGGGTTCAGTTTTTCAGGTTACAGGTGACAACTTGGCTATACATAGCCTTTTTGGATTTGTCAAATCATTCAGTGCAAAGTAGTGCTGTCGATTTTGTTCAACTGAAAAGGGAGAGATGCAATCagttttcagtgaagatcatcCAACTTTAAATCTGCGTTCTAAAGCCCTTCATTCAGAACACTGTGCTGCCATTCAACAAACTCCTGCTTTGTCCTCAACATTTGGTGTGAAACTAACCTGTCCACTCACTTCCCTCCAGCTGTTCCATACTTTAGACATCTGATTTTTGATCATCTTAagctttttaaatctatttcCAGACCAATTTGATTCCAAAGCACCATCTAATGATACATTTCCCACGGTGTATTAGGAAGATTGGGTGCATTAGCTTTCAGAGTCtgtaaaaaaactttaaaaacattcCAAAAAAACTAGCAAAGAGATATCAGAATCAGTTGGCTTTTCATTTTGagaacttttattttcaaagatTTCAATTTGGCCCCATTACTGAAGTCTTGGTCAGCAGTTTGGAGGGCAGTGAGGCGCTGAATTAAACTTTTGATTTGTCTGTTTTTCCCACAACTTCCTGGGTTCCTGGTTGTCCACAGTGACTGTAAAAAGAAGGTTGTCCACAACATTTTACACCTTTAGAGTAAATTTTGTTACACCTATTAGTGTTACTAAATTGGAGTCCAGTGTAGTCTGGTAGCTTAGAATTTGTAACACTGACACTATTCTAGGGTAATAACACTACTCTGTGTTGGCCAGTGTCTTTCAACTCGTTACAGGGTTGAATCAACTCCAGGTGAGTATAAAAATATTAACACTTTCAAAATTGTTAATTTAACACTGAAAAGAGTGGACGCATATAGACACTTTCCTAGTGTTAAATTTAACACTCAGTTAATTTAACACTGGTGATTTGGCATTCTACTACTACTGCATGGTGCAAAAGTAAAGAATGTTTAAACTCTTCCCATATTGGCATTAGGTAGACATACTTGAAAAAAGGATCTAAATAATTCAAATATGCAAATTGGTTCCTTATTATACTGTTGTACTGATTTATTTCAAGGtatttaaatagcaaatataTTACATTAAGCAGAGTGGTCTCTGTGCTCTACTACAGGGtaaacgttttttaaacaaagagatggagcagggactcCCTGCTAttaatattgtataaaatgaagttgcatattaaactgtgcCTAAAATAACGTGTATGGCATTataagcctttatacatacctctttaagtgcatagaatactaagctattaaaatattaattgtcggcatgattttataaatcatctttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166818 True 3426 lncRNA 0.39 4 15243201 15249512
TU166819 False 1952 lncRNA 0.40 5 15243201 15249829
XR_005640858.1 False 2247 lncRNA 0.39 4 15243198 15248330

Neighbor

gene id symbol gene type direction distance location
xrcc5 xrcc5 coding upstream 19958 15216368 ~ 15223240 (+)
tmem169b tmem169,LOC103361546,LOC102780762 coding upstream 27467 15210721 ~ 15215731 (+)
pfkla pfkl coding upstream 35497 15197169 ~ 15207701 (+)
si:ch211-45c16.2 map3k13 coding upstream 46979 15160313 ~ 15196219 (+)
LOC120569630 fam126b,LOC104961134 coding upstream 107505 15086370 ~ 15135693 (+)
smarcal1 smarcal1 coding downstream 14295 15264124 ~ 15276183 (+)
tmem41aa tmem41a,LOC103374480 coding downstream 95222 15345051 ~ 15348808 (+)
ankzf1 ankzf1 coding downstream 170973 15420802 ~ 15426678 (+)
myo10l3 LOC103370188 coding downstream 193625 15443454 ~ 15500197 (+)
pttg1ipb LOC104944099,LOC103370189 coding downstream 252288 15502117 ~ 15505588 (+)
G123989 NA non-coding upstream 11515 15226085 ~ 15231683 (+)
G123967 NA non-coding upstream 162052 15079454 ~ 15081146 (+)
G123931 NA non-coding upstream 227900 15013151 ~ 15015298 (+)
G123930 dip2a non-coding upstream 231762 15010978 ~ 15011436 (+)
G123911 NA non-coding upstream 287657 14951084 ~ 14955541 (+)
LOC120569294 NA non-coding downstream 165579 15415408 ~ 15416204 (+)
G124150 NA non-coding downstream 286706 15536535 ~ 15567461 (+)
LOC120570206 NA non-coding downstream 465777 15715606 ~ 15739958 (+)
LOC120569337 NA non-coding downstream 638308 15888137 ~ 15891006 (+)
G124229 NA non-coding downstream 662386 15912215 ~ 15912428 (+)
trpm2 trpm2 other upstream 84261 15137587 ~ 15158937 (+)
si:dkeyp-118h9.7 LOC102200331 other upstream 249364 14976595 ~ 14993834 (+)
G123742 NA other upstream 1009128 14233332 ~ 14234070 (+)
cps1 cps1 other upstream 1546864 13635554 ~ 13696334 (+)
G123633 NA other upstream 1889113 13353306 ~ 13354085 (+)
sumo3b sumo3,LOC106562996,LOC107668404,LOC106523318 other downstream 257155 15506984 ~ 15573848 (+)
galnt13 galnt13,LOC102796746 other downstream 368685 15618514 ~ 15661014 (+)
LOC120570321 NA other downstream 721153 15970982 ~ 15977874 (+)
dap1b dapl1 other downstream 849442 16099271 ~ 16101642 (+)
col28a2a LOC103355072,LOC104961148,LOC102781941 other downstream 1738242 16988071 ~ 17023560 (+)

Expression


Co-expression Network