G124146


Basic Information

Item Value
gene id G124146
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 15502748 ~ 15504712 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU166959
ACCATATTTCTGCCTGATTTCATCATGTCTCAGCTGCATTTCTGTTCTCatttttttcagatcCCCTCCTTAACAGCCATTTACTTTGCTTTCTGACGGCTCTTTCTGGCCCGGGTTTGTCGCTCCACCTTTGCATCTTCTTTCTTGTTCCCAATTCTTTCACACTTGCAGCAGCAAAAGCAGCAAACAAgaatggtgatgatgatgatgccacCCAGCACTGACATAGTGATGATCAAAATCTGGAAGTTTACTGGAAACAGAGAGAAGGGAAACACTGGAAATTACTCACTGATGAGCCATGTATCACATTATAAAGCCTATTAAATAGACACCACTGCCCCTTTTAGACTTTAGTTAGTTGGTGGTTGGGTTGGTCTAGTAAATCAAGACATTTAGCCAGTTAGAAGTTGCTTAATGGTTATTCTGTGGAGAAAAAGCACCATAATGAGTAATTCAGTCGTTATTCAGTCAAGTAATTGACTAGACAGTCACATCTTATCACTATTAGTAAACTAAGATTTATCTGAAGAAAGTCCTCTACTAGGGCTGACCATTGTTTCTATTGATTGATTATTCGTttgacttttaaaatgtcagaaaatagttatAAATGCCCATCACAAATTCCTAAAGCACACTTTGCTATCAAGtcagaaagataaaaaaaaaaatagcaaaccATCACAATCGAGAAGCTGTAACTTGAGAATGTTTGGCAAAAAGACTCAAACAACAAATTGATTGTGAAAATAGTGGCCATTACATTTTTGCAGGATATAGCCTACCCAGAGTTGGCATCAATGGTTATCTGAGGCCTGGTTTAGTCACTCTTACCCCAACACAACCCCCATCGTGCGTCATTCAATGGACAGATGCTGCTGGGGGGCAAGATGTTCCTCACTGGGTAGTCCACGCATTGTTTGGTTGGCATGCACCACAAACACTGcaacaaaaacagcaacaaatatTGTGCTTAGTCGTGgctgggttggttcagtgggtagagcaggcgaacatatatttagaggtttatgcctcgacgcagaggtccagggtttgactccgacctgtgacaatttcctgcatgtcttccccctttctctctcctttctcacttgtcctgtccattaaagacggaaagccccaaaaaaataaataaaactgtgcTTAGTATTGTATCTTTGGTATTTAGGCTACATCATTAACAATACTGAAGACAGTTATTTGTATTTGGCTGGAGATTaagagactt

Function

NR:

description
transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166959 True 1255 lncRNA 0.40 3 15502748 15504712

Neighbor

gene id symbol gene type direction distance location
glb1l glb1l,LOC100708354,LOC102776574,LOC102302597 coding downstream 70235 15426799 ~ 15432513 (-)
LOC120569293 LOC104943022,LOC104919017,LOC103370185 coding downstream 84838 15414619 ~ 15417910 (-)
LOC120569292 LOC103370192,LOC103461666,LOC104943023,LOC100710321,LOC105937152 coding downstream 88969 15411570 ~ 15413779 (-)
tra2b tra2b coding downstream 93277 15402680 ~ 15409471 (-)
igf2bp2a igf2bp2 coding downstream 103641 15352449 ~ 15399107 (-)
prpf40a NA coding upstream 63287 15567999 ~ 15585951 (-)
rprma rprm,LOC102780493 coding upstream 109962 15614674 ~ 15615857 (-)
nr4a2a nr4a2,LOC106586168,LOC104920078,LOC103363922 coding upstream 307972 15812684 ~ 15817665 (-)
LOC120570325 NA coding upstream 405234 15909946 ~ 15911626 (-)
LOC120569256 cytip coding upstream 411187 15915899 ~ 15919288 (-)
G124136 NA non-coding downstream 26600 15475258 ~ 15476148 (-)
trnak-uuu_17 NA non-coding downstream 85476 15417200 ~ 15417272 (-)
G124014 NA non-coding downstream 306530 15178318 ~ 15196218 (-)
G124001 NA non-coding downstream 378803 15116194 ~ 15123945 (-)
G124000 NA non-coding downstream 379294 15115730 ~ 15123454 (-)
LOC120569338 NA non-coding upstream 359820 15864532 ~ 15901689 (-)
G124304 NA non-coding upstream 597444 16102156 ~ 16102355 (-)
G124324 NA non-coding upstream 775872 16280584 ~ 16280878 (-)
G124346 NA non-coding upstream 817773 16322485 ~ 16322657 (-)
G124350 NA non-coding upstream 840576 16345288 ~ 16357884 (-)
G123960 NA other downstream 508959 14984485 ~ 14993789 (-)
G123886 NA other downstream 708251 14784561 ~ 14794497 (-)
ikzf2 ikzf2 other downstream 1301019 14175814 ~ 14201729 (-)
G123481 LOC106675207,LOC106674584,LOC106676400,LOC106674915,LOC106675345,LOC106676354,LOC106674636 other downstream 2882933 12619353 ~ 12619815 (-)
LOC120570668 LOC103354235,LOC105936145,LOC100692075,LOC108240393,LOC104918665 other downstream 3257743 12232420 ~ 12245005 (-)
G124303 dapl1 other upstream 594566 16099278 ~ 16101593 (-)
LOC120570587 LOC100705152,LOC102292123,LOC101476258 other upstream 702978 16207690 ~ 16222736 (-)
gcgb gcg other upstream 873776 16378488 ~ 16380765 (-)
LOC120570068 LOC103362129,LOC101485094 other upstream 876538 16381250 ~ 16389894 (-)
fastkd1 fastkd1,LOC102780871 other upstream 1530661 17035373 ~ 17042372 (-)

Expression


Co-expression Network