G124325 (cd302)


Basic Information

Item Value
gene id G124325
gene name cd302
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 16280944 ~ 16285287 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU167189
TGTTCAAACTCAAGCTGGGTTTTTGTTCGGATCAAGCTATTTACATGTGCCCTTGATAGCCTGCAATTGAGAATTCCTGTTTCTTTGAATACTGCGTAAAATGGACTCCACTGGTTTAAAAGACATGAGCATTTACCAGGCAGTCAAGGTCTAATGGAAGCATGCGATTGGTTGCATTATGTGAAATGTAGAATCCAGCATTTTTGGAGCTTGATACACACTAGGGACTAAACATCAGGGTGTCTCACTCTCTGCTGCATCAATTGCCCATTCTTATTTCAATCTCCCTCTTTTTAGTCCCTCAAGGTTTATGGCAATGCAATACTAAATCGCTGAGCATTTCTGTCTGCTCACAAAAAGTATGAAAGCTTTGCTCTTTATTTAATCCCTTCCATGAGCAATAGTTGGTTACTTTTAATATGCAAGAGAGAAATAATGATACCAAAGGTTATCAAGGAATGTGTAGTGCTTGATAATAATGTTACACATGACACGTGGACCAGACTGCAAAGTTGCTGATGCACCAGTCTGGAAAATGTACAGATGATTGTTCATTAGtgcaaatgacaaaaaaaaaaaccagaagCAGTGAGATGTTAATGTGCAACAGTGAGACGTTAGTATTCGAGTAAGCCTGACCTCAGTTTATACATTATTCTGAGTcatgtgtgtaacgtgttaacCCAAAACTATTTCAGTAACCGTTTTCTCTACCCAGTGAGCCTGGTGCTTCCTGTTGTGGAACAGAGGGAAGGTTCTCCTATGGCACGCTGTCAGTCTCCTCAGCCTCCACCAGACAGGACCGGTCTGTGTCCAGGACTCGGAACGGGGGGTGGTACTCAAATGCCGTGAGGATAGTGGAGCCGAGGTTGTACTTATGCTGCAGGAACCAAATGACTGCTGAGACTCCCATGATAGCCACCACGCTGAGAATGACCAGGGCGGACAGCAGCGCGCTGGGTTTCGGTTTGGCTTCCTCTGCctTCTGATTTGTCTCACAGACCACTCCATTCTCCGCCTGTTCCAGGCAGCTGACATTTTCCCACTTTCCTGTGTTGCTGTGCAGAGCCACACACGTATCCAAGGGCAAAAGGTCTGACGAAGACAAGATGTCTTCCCAGTTACTGAATCCTACAGGTTGCTCACCGAACCACCTCATGTCCTCACTTTGTGTCATAATACATTCCCAGCCACACGTTGACATTGTTTTTCCACACTGCTGGGCTATATTTAATGACAAAGTCATTCTCCTCAGCGCTTTGGATGGTCAAAAGCTCTAGAAAAAGCATAGCAATGTATGACAACAGAATTacttacacacacttacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatttagtcTTTGACAAgatatttgaaaataaaatgtctcaGGTACCAAATCCTTGGCAGAGTGTTTTTGCTCTTTCAAAAGTGTAGCTTTTGATTGTGTCTTCTTCTCCGTGGACAAAGTAGTAACATCCGCCTCCAAATGGTACCCAGGTGCGTCCGTCTGCAGGGCAGTCTGAGGAAAAACCATGGGACAACCCGGTAATGGAAAGATTTGGCTCCTGACCTATCTAGATTTCTTTTAGGTACGAAACATCAAATCACCATTTTAAGATGCAACAGCTTTGCATCATGTTTGATTGGATAGTTGATACTACAACCCCCAACAGACTGTACGTGTCTGTACCCTGTTGGTTAGTTTCAACTTATGACCACTGTTCCTCTTTATCAATATAGTTTGTGCCTGTGTTTAGCAAATGGTGTCATGCTTTTCTACTAGAAACTAGTGTAGCAGAACATTTCTAGACTGTTCCACTTAGTGTTTTACTGCTGCACCTGTTATTTGGGATCACATTATTTTCCCCTCTATGGAGCTCTGTTGTTAGTCTcaagcagtggtggaggaagtactcagatcttttacttaagtaaaagcagcaataccacagtgtaaaaatactctattacaagtaaaagtcttgGATTATAAATCTTActtagtaaaagtacaaatgtattagcatcaaaatacacttaaagtaccaaaagtaaacaTACTCATTATGcggaatggcccatttcagaatgaTTCATACAAGATTGCTGGATTGTAACAATTGATGCATACATCACTTTAATATTGCAGCTGGTCAAGGTGGAGGTAATTTCAACTACATGTGTATATGTAGCTTcatctataataataataataataataataatatcataatgTATTAGTTGATTTATGTGTTGTATTAATAATCGGAATTTGCAGTAAATATAGTTACTAAAGTTGTCAGACGGATGTAGTGGAATATAAAGTATAACATTTagcttctaaaatgtaaattggaGTAGAAGTATGAATTAGCATAAAATTGAAATAAcgttactcaagtaaagtaacgTTCCAGTACAAGTCTCAagcctcaaaattgtacttacaGTATTAAgtagagtaaatgtacttacttaGGCTACAATCCAACACTGGTCTCATACACTATCTTACACAAATGTTGCTTTAATCTGAGAGGTCTCATCTTTGTAGCAGTGTTTTAAGTGGCACTTTACAGTTAATACTTTTCCAGTTAGTATCCCTTTTGATTGGCGACATCGCTAGTCATTCCTCCACATGACGTTACCGGGCCAAATGAGGCACCTTCAGGCAACGTCTAAAAAAATTCTGCCTTGAAATACACCCACCTCTAAAAAGGGAAAACACGggttttacatttgttttatttgcttGTGGGTTTCGCAACATAGGGAAGCACACAACTTTACGTGACATGTCAAGCTTGGTTCATAAGTTATGTTGCCATATGCAAAACAACAGCGTCGACATTCAGTGCAACAATTGGTTTGCTAACAGTGAAACACTGTATGTCTAGTCAAGGCTACTGAAAtcagacacaaaacaaacacaaatacaaagtaCAAAGAGTTAAGGGCACTTGCTGTAACACAGGCCTACGCAATGCTAATTTAAACGGGTACGTGCGTACAACCGTAGCTAAGCATGCCATGCAAAAAGAGATCACGTTCATTTATCTTTGAGTGGAGATTCAGATTTAAACTCTTACCTCCCGTTATACCCAACTGCAActgaacacacaacacaaagacacagcatAACGGTGATAGGTAACGGTGACTTTTCTCCAGTGACTCCATGGCAGCGAAGACAAATAATCACGTACCACCAAACTACTTTTCTGACTGTTGCTCGACTCTagtgtcagcagcagcagcagcaacgtgAGCGAGAtcccacccacacaaacaca

Function

symbol description
cd302 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human CD302 (CD302 molecule).

NR:

description
PREDICTED: CD302 antigen

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167189 True 3336 lncRNA 0.41 4 16280944 16285287

Neighbor

gene id symbol gene type direction distance location
tanc1b tanc1,LOC101475961 coding upstream 73353 16105436 ~ 16207591 (+)
LOC120570318 NA coding upstream 184607 16013565 ~ 16096337 (+)
upp2 upp2 coding upstream 300045 15978286 ~ 15980899 (+)
LOC120570324 NA coding upstream 371092 15902687 ~ 15909852 (+)
kcnj3a kcnj3 coding upstream 584370 15668278 ~ 15696574 (+)
tank tank coding downstream 32087 16317374 ~ 16322778 (+)
tbr1b tbr1 coding downstream 51922 16337209 ~ 16341623 (+)
slc4a10b slc4a10 coding downstream 58748 16344035 ~ 16377228 (+)
scn1laa LOC103371728,LOC103392165,LOC101464243 coding downstream 374694 16659981 ~ 16685486 (+)
ttc21b ttc21b coding downstream 405230 16690517 ~ 16703295 (+)
G124323 NA non-coding upstream 66 16280599 ~ 16280878 (+)
G124229 NA non-coding upstream 368516 15912215 ~ 15912428 (+)
LOC120569337 NA non-coding upstream 389938 15888137 ~ 15891006 (+)
LOC120570206 NA non-coding upstream 540986 15715606 ~ 15739958 (+)
G124150 NA non-coding upstream 713483 15536535 ~ 15567461 (+)
LOC120569637 NA non-coding downstream 19476 16304763 ~ 16310641 (+)
G124339 NA non-coding downstream 95960 16381247 ~ 16381693 (+)
G124371 kcnh7 non-coding downstream 129322 16414609 ~ 16416452 (+)
LOC120570498 NA non-coding downstream 182753 16468040 ~ 16468636 (+)
G124408 NA non-coding downstream 311421 16596708 ~ 16630114 (+)
dap1b dapl1 other upstream 179302 16099271 ~ 16101642 (+)
LOC120570321 NA other upstream 303070 15970982 ~ 15977874 (+)
galnt13 galnt13,LOC102796746 other upstream 619930 15618514 ~ 15661014 (+)
sumo3b sumo3,LOC106562996,LOC107668404,LOC106523318 other upstream 707096 15506984 ~ 15573848 (+)
trpm2 trpm2 other upstream 1122007 15137587 ~ 15158937 (+)
col28a2a LOC103355072,LOC104961148,LOC102781941 other downstream 702784 16988071 ~ 17023560 (+)
myo3b myo3b other downstream 842594 17127881 ~ 17198590 (+)
hoxd10a hoxd10,LOC102792757 other downstream 1574873 17860160 ~ 17881328 (+)
hnrnpa3 hnrnpa3 other downstream 1725470 18010757 ~ 18017413 (+)
G125079 NA other downstream 2417741 18703028 ~ 18704528 (+)

Expression


Co-expression Network