LOC120570068 (LOC103362129,LOC101485094)


Basic Information

Item Value
gene id LOC120570068
gene name LOC103362129,LOC101485094
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 16381250 ~ 16389894 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU167229
AGTGGTACACTGACAGGGACCACAGTCTCAGAGGATCAGCTTTCCGTCATACATACACCCTCATGAGCCACTTCCTGCAGAAATGCCTCCTTAATCCCAAATAGATGTGAAGAATGTAACAGCTTTTATAGTGAACATTACCacagtaaatttttttttttatttgtgtatttttcttaCTGATATTCTGAAGTGTCAGGTTGATTTTTATGCAGCAATGGATGTTCTATTACTCGTACAAATGAgcatttgtattttatgtggATTTAGGGAACCTTTGTCAGGATATCTGACatttaattatataaaataCTAAAAGCCATTGCATGCATTTATGG
>XM_039818294.1
GAAAGTTGTGCAGGCTGCAGACTTCAGGGAGGCATCTCTGTCTGCTGTCGGACTCCTCAGGAATGCAGCGGGAAGTGTGAGAAGCCTAGTTTCAACTAAAAGTAGGACGTAGCTCAGTTTTCTCATGTTGTCAACTTTAGTTTCAAGCTATTGTTACGAGTTTGTTGCTGTAAGAGTATGTTAACCAGGCTGCTTGTCCAAGAAGTCACTTTAAACTTCACATCATCGACCTTCAAGGATTATTAATATTGAAGACTGAGAGCTTCACGGCGACTTCTTCTGCATCATGGGCTGCAGCAAGGTGCTGTGGGGGGTGATAGGGGCGGCTGTCGTCATCACGTTAATAACGATCCCAGCAGTTTATTTCAGCAAATCTGATCGTGCCAAAAGGCCTTTTACCCTCGAAGATTACTTCAACAACACCATTAGGTGGAAATCCTACAATTTGTATTGGATATCAGACAAGGAGTATCTGCATAAAACAAGAGATGGGAATGTCTTCCTCCACAATGCTGAAACAAATGAGGAGTCACTATATTTGAGCAATTCAACCTTtGCTCAAGTGGATGCCACAGATTACATGTTGTCAGGTGATTATAAATACATCGCTTTTGAAAGCAATTTCACAAAGAAATGGAGACATTCATTCACAGCCTCTTACTCCATCTATGACAGGGACCGTTCAACATTTCTTATGCCTGTGAACTTTCCAACGGTTGTGCAGTACTTTGCCTTCGccccaaaaggaaacaaatatgCTTACGTTTCAGACTTTAACGTTTTCTTCAAGTCCAACGTCACTGCTGAAGCTGTACAAGTGACCCACAATGGTAAAAAGAATGAGATCCTTAATGGTGTCCCTGACTGGGTATATGAGGAGGAAGTGTTTGGATCAAACAGGGCAATATGGTGGTCATCAACTGGAAAATTCTTGGCTTATGCAGAGTTTAATGATACAGATGTTCACAAAGTGGAGTTCTCATGGTATGGAACCGAGCAGTATCCTCAAACAGTGGCTGTTCCGTACCCAAAGGCTGGATCTCCCCTTACCAAGGTGAAACTGTTTGTGGTTGATACCACAGATCCATCGCGCCCCACACAGGTGGTTGCCCCCGCTTCTGTTGCTTCTGGCGATCACATGTTGTGCTCAGTGACCTGGGTTACAGACGAACGCGTCGCTGTGCAGTGGGTCACAAGGAAACAGAATTACGTGGTTGTACAGATCTATGACTTTGATGGAAGCAGCTGGCAAGAAAAACAGAAATTTGAGCAAACAAGCAAGACAGGATGGGTCGGCCACTACGTGCCCTTACCTCTTTTCTTTGCTGATGATAAACTCAGTTTCTACAAAGTGATGAGTGACACTCAGGGCTACAAGCATATTCATTATGTGAAAGATGGCAAAGCAACACCTATTACATCTGGGAAGTGGGAAGTCATTTACATATCCAAATTAACAAAAGATTCCATCTATTTTGTGAGTAATGAGTACCAAGGAATACCCGGGAAGAGAGAGCTTTACAAGATTCTGATTGGAAGCAGCCCTTCTGCTCCTCAGTGTCTCACCTGTGGCTTGCGTAAGGACAGGTGTCAGTACAACTCTGCTTACTTCAGCTTTGACGCCTCTTACTACCGAATGGATTGCTACGgaCCTGGGCTGCCCCACTACACACTCATTGACAACAGGGGATCAGGTGCAGagctCGCTGTTCTTGAAGAGAACAAGGAACTGGAAAATATTCTGTCAGAATTCCAAATGCCAACAATGCAGTATGGGACACTTAAGGTTGCAGGATATGATCTTTGGTATCAAATGATGTTACCACCAAATTTCAAGAAGTCTAAAAAATATCCTCTTCTTATTGATGTGTATGGCGGCCCCTGTAGTCAGCAGGTGGACTATCGTTTCAAGCTGAACTGGGGCACATACCTCTCCAGTTCACACGGGATCATCATCGCTAGCTTTGACGGAAGGGGGAGTGGTTACCAGGGCGATGAAATAATGCACGCAATCTACAGGCGCCTTGGAACATTTGAAGTGGAGGATCAGATAACAGCTGTGAGGAAATTCATCGACATGGGTTTTATCGACAAAGACAGAATAGCAATTTGGGGCTGGTCATATGGTGGCTACGTCACCTCAATGGCCTTGGGTGCTGGAACTGGACTCTTCAAGTGTGGAATAGCAGTTGCCCCAGTGGCCAAGTGGGAATATTATGATGCAGTGTACACTGAACGCTACATGGGCAAGCCCACAGAGAATTCAGACTCTTACaatAATTCCACAGTGACGGCCAGGGCAAAGAACTTCAAAACAGTAGACTATCTATTGGTTCATGGCACAGCAGATGATACTATATGCACTGATGCTTGCCATTCATTTCAGTGGTACACTGACAGGGACCACAGTCTCAGAGGATCAGCTTTCCGTCATACATACACCCTCATGAGCCACTTCCTGCAGAAATGCCTCCTTAATCCCAAATAGATGTGAAGAATGTAACAGCTTTTATAGTGAACATTACCacagtaaatttttttttttatttgtgtatttttcttaCTGATATTCTGAAGTGTCAGGTTGATTTTTATGCAGCAATGGATGTTCTATTACTCGTACAAATGAgcatttgtattttatgtggATTTAGGGAACCTTTGTCAGGATATCTGACatttaattatataaaataCTAAAAGCCATTGCATGCATTTATGGTTGAATATGATGTCAAACAACAGATCAATTGCACTGCACTGATTTGTTGTGAGTGTTGTAATTTGCGTTGCAGTCATGTTCTAAAGAATAAAAATTGTTTTGAAATA

Function

NR:

description
PREDICTED: dipeptidyl peptidase 4-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0016020 membrane cellular_component
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K08674 FAP; fibroblast activation protein, alpha

RNA

RNA id representative length rna type GC content exon number start site end site
TU167229 False 338 lncRNA 0.35 1 16381357 16381694
XM_039818294.1 True 2829 mRNA 0.43 25 16381250 16389894

Neighbor

gene id symbol gene type direction distance location
LOC120569635 rbms1,LOC104955249 coding downstream 75366 16288239 ~ 16305884 (-)
cd302 cd302 coding downstream 95985 16280938 ~ 16285265 (-)
LOC120570585 NA coding downstream 105687 16223335 ~ 16275563 (-)
LOC120570319 ccdc148,LOC102793443 coding downstream 367096 15981374 ~ 16014154 (-)
LOC120570317 acvr1 coding downstream 411281 15944863 ~ 15969969 (-)
ifih1 NA coding upstream 147 16390041 ~ 16401166 (-)
LOC120570230 kcnh7 coding upstream 13668 16403562 ~ 16443170 (-)
fign fign coding upstream 102468 16492362 ~ 16515624 (-)
grb14 grb14 coding upstream 172848 16562742 ~ 16596820 (-)
LOC120569755 NA coding upstream 207027 16596921 ~ 16605484 (-)
G124350 NA non-coding downstream 23366 16345288 ~ 16357884 (-)
G124346 NA non-coding downstream 58593 16322485 ~ 16322657 (-)
G124324 NA non-coding downstream 100372 16280584 ~ 16280878 (-)
G124304 NA non-coding downstream 278895 16102156 ~ 16102355 (-)
LOC120569338 NA non-coding downstream 479561 15864532 ~ 15901689 (-)
G124366 NA non-coding upstream 11864 16401758 ~ 16402030 (-)
G124382 NA non-coding upstream 97936 16487830 ~ 16488496 (-)
LOC120569756 NA non-coding upstream 232049 16621943 ~ 16622411 (-)
G124463 NA non-coding upstream 373761 16763655 ~ 16776734 (-)
G124503 NA non-coding upstream 493540 16883434 ~ 16884174 (-)
gcgb gcg other downstream 485 16378488 ~ 16380765 (-)
LOC120570587 LOC100705152,LOC102292123,LOC101476258 other downstream 158514 16207690 ~ 16222736 (-)
G124303 dapl1 other downstream 279657 16099278 ~ 16101593 (-)
G123960 NA other downstream 1387461 14984485 ~ 14993789 (-)
G123886 NA other downstream 1586753 14784561 ~ 14794497 (-)
fastkd1 fastkd1,LOC102780871 other upstream 645479 17035373 ~ 17042372 (-)
LOC120569287 LOC103391581,LOC104924425,LOC103375901 other upstream 1723216 18113110 ~ 18115097 (-)
prkra prkra other upstream 1766838 18156732 ~ 18163749 (-)
G125089 dct,LOC102781940 other upstream 2305586 18695480 ~ 18699802 (-)
G125090 NA other upstream 2310993 18700887 ~ 18704677 (-)

Expression


Co-expression Network