G124661


Basic Information

Item Value
gene id G124661
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 17437361 ~ 17437819 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU167648
CCAAAGTCTGGAAATCGTCTTTTAGGTTTTCCTGCTGATGAGGCCTCATTTAGCTCCTCTTTGCTCTTTCCTTTTGATTCCCTCTTCTTGACATTGTGCATGAATCCAGAGGGGGAATGTGGCGACAAGGTGTCTTTTGGAAGGGAAAAAGAAGGACTTCCGCTGCTTTCAACACTGTCTCCCTGTGATAGTGACAAAGATGGGCTGCTGGAGAGCTCTGCCTGACTCCTGGATCCATCTTTATTCTCTCCTGGAACATCTTTCTGTCCATTCCCAGGATAGCAGACAGGCACTGGGAGGGACAGGCTCTCCTGGATCGACCTCCTCCTCCTGGGAGATTcctgctcctcctgctcctcctcttcttcagttTCCT

Function

GO: NA

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes
ko05410 Hypertrophic cardiomyopathy
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
TU167648 True 376 lncRNA 0.50 2 17437361 17437819

Neighbor

gene id symbol gene type direction distance location
pdk1 pdk1,LOC108240758 coding upstream 6467 17424921 ~ 17430894 (+)
itga6a itga6 coding upstream 16007 17402757 ~ 17421354 (+)
dlx1a dlx1 coding upstream 57310 17377198 ~ 17380051 (+)
hat1 hat1,LOC102775709 coding upstream 86605 17331209 ~ 17350756 (+)
dync1i2a dync1i2,LOC103355058,LOC103392097 coding upstream 132268 17288114 ~ 17305093 (+)
rapgef4a rapgef4,LOC101483582 coding downstream 27409 17465228 ~ 17498084 (+)
zak LOC104965553 coding downstream 63876 17501695 ~ 17526704 (+)
cdca7a cdca7 coding downstream 90131 17527950 ~ 17532256 (+)
sp9 sp9 coding downstream 194909 17632728 ~ 17634939 (+)
scrn3 scrn3,LOC102796247 coding downstream 205519 17643338 ~ 17648252 (+)
G124631 NA non-coding upstream 174535 17261737 ~ 17262826 (+)
G124627 tlk1,LOC102777640 non-coding upstream 179859 17256842 ~ 17257502 (+)
LOC120570569 NA non-coding upstream 425449 17010145 ~ 17011912 (+)
LOC120570570 NA non-coding upstream 428853 17006585 ~ 17008508 (+)
G124524 lrp2 non-coding upstream 479447 16956725 ~ 16957914 (+)
G124671 NA non-coding downstream 31929 17469748 ~ 17498759 (+)
LOC120569550 NA non-coding downstream 167326 17605145 ~ 17614067 (+)
G124794 chrna1 non-coding downstream 226853 17664672 ~ 17666075 (+)
G124797 chn1,LOC102233772 non-coding downstream 234436 17672255 ~ 17674455 (+)
G124804 NA non-coding downstream 249752 17687571 ~ 17687814 (+)
myo3b myo3b other upstream 238771 17127881 ~ 17198590 (+)
col28a2a LOC103355072,LOC104961148,LOC102781941 other upstream 413801 16988071 ~ 17023560 (+)
dap1b dapl1 other upstream 1335719 16099271 ~ 16101642 (+)
LOC120570321 NA other upstream 1459487 15970982 ~ 15977874 (+)
galnt13 galnt13,LOC102796746 other upstream 1776347 15618514 ~ 15661014 (+)
hoxd10a hoxd10,LOC102792757 other downstream 422341 17860160 ~ 17881328 (+)
hnrnpa3 hnrnpa3 other downstream 572938 18010757 ~ 18017413 (+)
G125079 NA other downstream 1265209 18703028 ~ 18704528 (+)
LOC120570507 NA other downstream 1380934 18818753 ~ 18827547 (+)
tmsb4x NA other downstream 1651599 19089418 ~ 19090785 (+)

Expression


Co-expression Network