Gene
RNA
| Item | Value |
|---|---|
| gene id | G124901 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053123.1 |
| NCBI id | CM020920.1 |
| chromosome length | 39440604 |
| location | 18129251 ~ 18182236 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU167968 | True | 927 | lncRNA | 0.46 | 2 | 18129251 | 18182236 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| agps | agps,LOC102790648 | coding | upstream | 67957 | 18030825 ~ 18061294 (+) |
| hoxd3a | hoxd3 | coding | upstream | 219655 | 17901079 ~ 17909596 (+) |
| hoxd4a | hoxd4 | coding | upstream | 229553 | 17896012 ~ 17899698 (+) |
| hoxd9a | hoxd9,LOC100697606,LOC102311238,LOC101477388,LOC102193136,LOC102792463 | coding | upstream | 244635 | 17882466 ~ 17884616 (+) |
| hoxd11a | hoxd11 | coding | upstream | 251098 | 17873682 ~ 17878153 (+) |
| gpr1 | gpr1 | coding | downstream | 29716 | 18211952 ~ 18213811 (+) |
| LOC120569837 | ndufs1 | coding | downstream | 32735 | 18214971 ~ 18223611 (+) |
| LOC120569834 | ino80d | coding | downstream | 42012 | 18224248 ~ 18233735 (+) |
| uggt2 | uggt2 | coding | downstream | 353331 | 18535567 ~ 18581030 (+) |
| LOC120570426 | abcc4,LOC103357783 | coding | downstream | 429124 | 18611360 ~ 18651667 (+) |
| G124895 | NA | non-coding | upstream | 39708 | 18089225 ~ 18089543 (+) |
| G124841 | hoxd12,hoxd10,LOC108239741,LOC107579206 | non-coding | upstream | 247746 | 17860753 ~ 17881505 (+) |
| G124834 | NA | non-coding | upstream | 293025 | 17834219 ~ 17836226 (+) |
| G124819 | NA | non-coding | upstream | 392265 | 17736110 ~ 17736986 (+) |
| G124816 | atp5g3,LOC102234286 | non-coding | upstream | 396000 | 17730056 ~ 17733251 (+) |
| G124914 | adam23 | non-coding | downstream | 5182 | 18187418 ~ 18188518 (+) |
| G124915 | NA | non-coding | downstream | 6604 | 18188840 ~ 18189132 (+) |
| G124924 | NA | non-coding | downstream | 51806 | 18234042 ~ 18297620 (+) |
| LOC120569814 | NA | non-coding | downstream | 109174 | 18291410 ~ 18292443 (+) |
| G124966 | NA | non-coding | downstream | 260052 | 18442288 ~ 18454627 (+) |
| hnrnpa3 | hnrnpa3 | other | upstream | 111838 | 18010757 ~ 18017413 (+) |
| hoxd10a | hoxd10,LOC102792757 | other | upstream | 247923 | 17860160 ~ 17881328 (+) |
| myo3b | myo3b | other | upstream | 930661 | 17127881 ~ 17198590 (+) |
| col28a2a | LOC103355072,LOC104961148,LOC102781941 | other | upstream | 1105691 | 16988071 ~ 17023560 (+) |
| dap1b | dapl1 | other | upstream | 2027609 | 16099271 ~ 16101642 (+) |
| G125079 | NA | other | downstream | 520792 | 18703028 ~ 18704528 (+) |
| LOC120570507 | NA | other | downstream | 636517 | 18818753 ~ 18827547 (+) |
| tmsb4x | NA | other | downstream | 907182 | 19089418 ~ 19090785 (+) |
| igsf3 | LOC103352919,LOC104967650 | other | downstream | 1205779 | 19388015 ~ 19459274 (+) |
| LOC120569357 | LOC103369896,LOC102289365,LOC102197623,LOC101484406 | other | downstream | 1786124 | 19968360 ~ 19993324 (+) |
