G125460


Basic Information

Item Value
gene id G125460
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 19898684 ~ 19899174 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU168753
AAAAAGGCATATTTAAAGGCTCTAGGCCGCcttacacattattgtaggccctgTTTAATATGCAgctcaattttatacaatatgtatagcaaggggtccctgctccgtctctttttcagctgaggggtccttggcctaaaaacgatggagacccctggtctaaagCATAGTCCGCACAAAATCATGAACAGATAAAGATGATTTACGCTGAGACGTAAACTATCATCTGGTTTCTGCACACTACCTGCACGTCAAAGAAGCCATGAGTAAGACAGCATTACGTTTTacaaagtttgttttatttactgATTACAGTACTGGTGGATTTGCCATTTCCGTGTTATTTGTTTTGCTTACATACAGTAAGTACACATTGTGAATGTCTATGTGAATGAATGTTGTGAGGTGTGATGTTTTTCTTAATTGTCAGAGAGCACgaagtatgtacagtattttctcAGAGAATGGAAAGAGCTCTAGTTGCAAAGACA

Function

NR:

description
PREDICTED: semaphorin-6D-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168753 True 491 lncRNA 0.39 1 19898684 19899174

Neighbor

gene id symbol gene type direction distance location
LOC120569249 NA coding downstream 124653 19771293 ~ 19774031 (-)
gja5a gja5 coding downstream 182764 19704828 ~ 19715920 (-)
acp6 acp6 coding downstream 196665 19695451 ~ 19702019 (-)
LOC120570427 LOC103352913,LOC100708017,LOC104953986 coding downstream 323093 19570871 ~ 19575591 (-)
LOC120570428 kcne2 coding downstream 339165 19557510 ~ 19559519 (-)
nr1i2 nr1i2 coding upstream 1068 19900242 ~ 19907077 (-)
cfap91 NA coding upstream 9320 19908494 ~ 19913720 (-)
zgc:113337 cd200,LOC103369899 coding upstream 34976 19934150 ~ 19943910 (-)
pdzk1 NA coding upstream 54056 19953230 ~ 19958864 (-)
LOC120569358 fam155a,LOC104934532,LOC103370067,LOC102785965 coding upstream 126905 20026079 ~ 20118310 (-)
G125459 NA non-coding downstream 302 19898002 ~ 19898382 (-)
G125458 NA non-coding downstream 754 19897667 ~ 19897930 (-)
G125434 fstl1 non-coding downstream 38447 19817239 ~ 19860237 (-)
G125432 NA non-coding downstream 74280 19823744 ~ 19824404 (-)
LOC120569252 NA non-coding downstream 113911 19782728 ~ 19784773 (-)
G125524 NA non-coding upstream 92234 19991408 ~ 19993321 (-)
G125539 NA non-coding upstream 244409 20143583 ~ 20144749 (-)
G125543 NA non-coding upstream 248242 20147416 ~ 20149179 (-)
G125551 NA non-coding upstream 330911 20230085 ~ 20232060 (-)
G125605 NA non-coding upstream 431334 20330508 ~ 20330715 (-)
LOC120570223 NA other downstream 102464 19790052 ~ 19796220 (-)
si:ch211-214p13.3 NA other downstream 130098 19751701 ~ 19768586 (-)
G125326 dopey2 other downstream 301163 19595929 ~ 19597521 (-)
tbl1x LOC103352926,LOC104925011,LOC102307724 other downstream 639838 19231987 ~ 19258846 (-)
G125090 NA other downstream 1194007 18700887 ~ 18704677 (-)
si:ch211-214p13.7 NA other upstream 22094 19921268 ~ 19923735 (-)
G125619 col4a2 other upstream 559988 20459162 ~ 20461629 (-)
G125620 col4a2 other upstream 564935 20464109 ~ 20467185 (-)
LOC120570047 dynlt3 other upstream 835376 20734550 ~ 20738320 (-)
G125842 NA other upstream 1054487 20953661 ~ 20960064 (-)

Expression


Co-expression Network