G125524


Basic Information

Item Value
gene id G125524
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 19991408 ~ 19993321 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU168838
GGTATTTGACATAGAGATTTTATTAGAATTAAATAACATTACacaaaaaagcaaagcaaattACTACCATGGACAGCCATGGTAGTAACTCTGTGTCTTAGAGACAGATAGGAAAACACAAAATGCTAATCTGTCAGACATGAGAATCAACAATTTAGTAAGCCACAGCAGCCAGAATCAAATCTCAAAGATCACATGTAACAAATGGCACAGAATCGGCGTCTACTTTATGATCCTGGCTCCTTGtctgacacactcacagacacacacttttcaTACTTAAATACACAAATGCTATCCAGATGATCCTCATGCAGGGAGATAGCAAATCCCTTCTGTCTGCCAAGTCAGAAACAACAAATAGTGTCTGTAATGACAACCATAATAGCAATAAATCTGCGCTGTCATAAGGGAGGTAGACCTGTTGCACCTCCTCCATCTTGAGCATAAACCAGAACGGACTACTACACATTCCAAACCACAAGTAACCACTAAAGGCCTTATAGCGTCATAGCAGCACAAACACACTTGTCAAGATAACAGCGTGGACAGCAGCCAAGAAAACCACATCAGCAATTTTTTcgtttccgtttcagaaaggaCAATAGTCAAAGCATAAACTCTGTATACGTCTTTTCTATGGATGGGTAAACAAGGCCGCCAAATGCTTTCATCTCCAGCTCTCGTTTTGCGTGAAACAACAGTGActcatgtatacacacacatacacagacatacagatacTGTACACTCAAAACACACTTAAGGCAATGGTGGCCTGGCCATTGTGACCGTTCGAGTAGATCTAAATGTGCCCTTGTATGCTTCTCTAACCCTTCATCCCTGTCCATCCCATATGAGCCTGCAGCCTGAACAAGCTGCTTAGAAATATGTAACACTACTACAGATCACTAAAACACAAGATCAGCTCTTTGCTTCACAGAACATCACATAGCAAATACACAAgagaatatattattatatcatattaACACCTGATTTCAGTACAATTTAGAATACTATGTGTACATTAATAAGGATACAGATGAACAGGTATGGGCGCTGATAAAACGGATACAATTTATACTTGCATGTTGTTAAGGAAGGCTTGTGTCTCCACATATTGTCGCTGACATTCACAGGAAGATGGCTGCACTAATCCAAAATCCACCCTAGAGACAGTAAACATCAACACTAATGAAACAATACCCAGAAAACATGGTCTTTAATCCTCATCATTCTGTTCCACAATATTATTTCAACACTCACTCCGCATGGATCATATTGATATGATGGTTGAAATGACGAATGCATCTTCATTATAATACAACCCTGAAAATTATATTAAAACATAGGTTACACTGCAACTTACTGCGTATGTGCAAGAGAGCTCTGCTCATCTCGTATGACTTAACAACAAAGATGTTTGTGACAGCCTTAAAAATTGTCTGCATCGTGGAGGTTTTTTCTGGTGCTTTTAAGGGACAATGAAGCATTTGTTGTGACATAAATGAGCTTCTCATTTTATAAGGAAATGTGTACTAGTAATTAAAAAAGCAAGGCTGGGTTACCAGCCAACGCTGGAAACTGTTCCAAAAGCCTCAAATTCACTGTGTGGCTTTGGCAATTGGATTAATTGCAAATGTGTAAGTGATTTTGCACCAcaaaagtaaaatatcaacaAATGGAAAAGCTGAAATAACTTCTAACCATCACAatacaaacaattaaaatacaTGACATTGGCTGGGCATTCAAGCAATGAGTTTTCTTTgcaattcaaattttttttatccttttaccACTGCTGAGCGGATTTGTCATGAATGCACCTGGCTTTGCGCCCAGTCAGGCAATTTTGCTCCTCAGCTTTGCTCACATTAAACAATTACCATAGGACCCTGCCGACACCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168838 True 1914 lncRNA 0.39 1 19991408 19993321

Neighbor

gene id symbol gene type direction distance location
pdzk1 NA coding downstream 32544 19953230 ~ 19958864 (-)
zgc:113337 cd200,LOC103369899 coding downstream 47498 19934150 ~ 19943910 (-)
cfap91 NA coding downstream 77688 19908494 ~ 19913720 (-)
nr1i2 nr1i2 coding downstream 84331 19900242 ~ 19907077 (-)
LOC120569249 NA coding downstream 217377 19771293 ~ 19774031 (-)
LOC120569358 fam155a,LOC104934532,LOC103370067,LOC102785965 coding upstream 32758 20026079 ~ 20118310 (-)
irs2b LOC104955106,LOC103372228 coding upstream 305760 20299081 ~ 20316292 (-)
col4a1 col4a1 coding upstream 347965 20341286 ~ 20389402 (-)
rab20 rab20 coding upstream 478286 20471607 ~ 20476349 (-)
ube2al ube2al,ube2a,LOC105934920,LOC104955100,LOC103021436,LOC103029486,LOC108259060,LOC107552373 coding upstream 498845 20492166 ~ 20498871 (-)
G125460 NA non-coding downstream 92234 19898684 ~ 19899174 (-)
G125459 NA non-coding downstream 93026 19898002 ~ 19898382 (-)
G125458 NA non-coding downstream 93478 19897667 ~ 19897930 (-)
G125434 fstl1 non-coding downstream 131171 19817239 ~ 19860237 (-)
G125432 NA non-coding downstream 167004 19823744 ~ 19824404 (-)
G125539 NA non-coding upstream 150262 20143583 ~ 20144749 (-)
G125543 NA non-coding upstream 154095 20147416 ~ 20149179 (-)
G125551 NA non-coding upstream 236764 20230085 ~ 20232060 (-)
G125605 NA non-coding upstream 337187 20330508 ~ 20330715 (-)
G125658 NA non-coding upstream 591327 20584648 ~ 20584932 (-)
si:ch211-214p13.7 NA other downstream 67673 19921268 ~ 19923735 (-)
LOC120570223 NA other downstream 195188 19790052 ~ 19796220 (-)
si:ch211-214p13.3 NA other downstream 222822 19751701 ~ 19768586 (-)
G125326 dopey2 other downstream 393887 19595929 ~ 19597521 (-)
tbl1x LOC103352926,LOC104925011,LOC102307724 other downstream 732562 19231987 ~ 19258846 (-)
G125619 col4a2 other upstream 465841 20459162 ~ 20461629 (-)
G125620 col4a2 other upstream 470788 20464109 ~ 20467185 (-)
LOC120570047 dynlt3 other upstream 741229 20734550 ~ 20738320 (-)
G125842 NA other upstream 960340 20953661 ~ 20960064 (-)
LOC120569741 LOC104951940,LOC103391685,LOC103352881 other upstream 985680 20979001 ~ 20986633 (-)

Expression


Co-expression Network