G125539


Basic Information

Item Value
gene id G125539
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 20143583 ~ 20144749 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU168856
agaaagtgaaaatgtgtgCTTAGAAAAGAATTTGTCTACATTGTTTtgatatagaaaaaaaacattaagtcAATGGAAAATCCCTCAAACTGACTGCTAGATAAAGTTGAATCATTCAGATGTCTGACCGTTCAGATATCCCATTAATGTTTCTTCACTGTGGAGTCAGTGTAAGTCATGGTAGATGTACACAAATAATGTCAACACTGTGCAGGTCCATTACAGAAATTTGCCAAGACTCAACGTGATCACATGCCAGCTTCCAAAAGCAAATTCAAAATTATGCCAACACTTCCAACAGCATTAATTCCACTCTATTAACAATTATATGAACATATAAAAATATGTTCCATGGTGCATTTGCAACAattttctttataaaaaaagaagagacatTCAGTTTGattccatttcttttcatcAACAGTAACAATACATTTGGATAGGATATAAACCCAATATTGTAGTTATTAATTTTGCTTCAAGCAAGCCACCAAAACAATAAGTCAAATGAAGTTCCCACATCTTTACTTGAATGAAGATATGGCGCAATGCAAACtaacagcagtgtgtgtgcgGAACTAAATGAGTGTATATTCACATGGTGGAATTCTGATCGACAATATGCTCTACCAACATATGAGATAAATCTAACTCAGTTTATGGGTttgaaataatacaaaaatgtctgaCACTGTTGTGTGTCACTGGTGGCAAAAAGTCgcacaaaaaaagttgaaaagacCATCTATACACTATTTCTTGTAAAGCACACTTGTTAATTTAAGACCATAATTTACATTCATAGTAGCCTTTAAGTTGATTTCAAGGTTTCAAGTTGACATTGACAAacaaatttggtcttttgatgtTTGTTAGATTTTGTTTAGCATACTGTTAACAAACATATGGCTAAGGAGGTCTGTATTCAAATGGCTTTAGTACCGCCGCAGTGCAGCACGCTGAATTTGGAAAGCAAGAGCAGAtaacagcgttttaacaatCAGACTCAGCTCCACCTCttggaagacatgcaggaaaggttAATTAGCTCAATAAAAGCCCTCCAATTGAGTAAAGCCATTTTGCCACATGAGAACCTAGAATCATCAAAATAACAATTATGATGCTgataatataaaacaaataatcaCGTTAGATTAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168856 True 1167 lncRNA 0.34 1 20143583 20144749

Neighbor

gene id symbol gene type direction distance location
LOC120569358 fam155a,LOC104934532,LOC103370067,LOC102785965 coding downstream 25273 20026079 ~ 20118310 (-)
pdzk1 NA coding downstream 184719 19953230 ~ 19958864 (-)
zgc:113337 cd200,LOC103369899 coding downstream 199673 19934150 ~ 19943910 (-)
cfap91 NA coding downstream 229863 19908494 ~ 19913720 (-)
nr1i2 nr1i2 coding downstream 236506 19900242 ~ 19907077 (-)
irs2b LOC104955106,LOC103372228 coding upstream 154332 20299081 ~ 20316292 (-)
col4a1 col4a1 coding upstream 196537 20341286 ~ 20389402 (-)
rab20 rab20 coding upstream 326858 20471607 ~ 20476349 (-)
ube2al ube2al,ube2a,LOC105934920,LOC104955100,LOC103021436,LOC103029486,LOC108259060,LOC107552373 coding upstream 347417 20492166 ~ 20498871 (-)
ankrd10b ankrd10,LOC102292027 coding upstream 354704 20499453 ~ 20515203 (-)
G125524 NA non-coding downstream 150262 19991408 ~ 19993321 (-)
G125460 NA non-coding downstream 244409 19898684 ~ 19899174 (-)
G125459 NA non-coding downstream 245201 19898002 ~ 19898382 (-)
G125458 NA non-coding downstream 245653 19897667 ~ 19897930 (-)
G125434 fstl1 non-coding downstream 283346 19817239 ~ 19860237 (-)
G125543 NA non-coding upstream 2667 20147416 ~ 20149179 (-)
G125551 NA non-coding upstream 85336 20230085 ~ 20232060 (-)
G125605 NA non-coding upstream 185759 20330508 ~ 20330715 (-)
G125658 NA non-coding upstream 439899 20584648 ~ 20584932 (-)
G125694 NA non-coding upstream 522297 20667046 ~ 20667405 (-)
si:ch211-214p13.7 NA other downstream 219848 19921268 ~ 19923735 (-)
LOC120570223 NA other downstream 347363 19790052 ~ 19796220 (-)
si:ch211-214p13.3 NA other downstream 374997 19751701 ~ 19768586 (-)
G125326 dopey2 other downstream 546062 19595929 ~ 19597521 (-)
tbl1x LOC103352926,LOC104925011,LOC102307724 other downstream 884737 19231987 ~ 19258846 (-)
G125619 col4a2 other upstream 314413 20459162 ~ 20461629 (-)
G125620 col4a2 other upstream 319360 20464109 ~ 20467185 (-)
LOC120570047 dynlt3 other upstream 589801 20734550 ~ 20738320 (-)
G125842 NA other upstream 808912 20953661 ~ 20960064 (-)
LOC120569741 LOC104951940,LOC103391685,LOC103352881 other upstream 834252 20979001 ~ 20986633 (-)

Expression


Co-expression Network