G125708


Basic Information

Item Value
gene id G125708
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 20691897 ~ 20697240 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU169078
ccccgctgatccagatcggaccagccaaataCAGAGTTGTGaccgCTCTGCTACAATCCTCATTCCACCAAGGTACCACTTTCTTCCTGCCTGTGACGGCCCTATCCACCGCCAGCATGTAATGTGGGGTAATGGGTTTAATTTTTACAAATgactacaaacacatttttcttagaaatgtttattcttttcataaattgtttgttttataaaattgttaATTTGTACCTGTTTTCTGGTTTCTCCACATGCTGCTGTTGCTGAGCCATCTGCCAAAGGGAGAGCTGGAGTTTGAAATTGTCCTTTATACTCCACCACAGGAAGTGGAATGAACCAACTCTTGGCAGTGGGCAGGGGGACTCTGAACTACAAAATACTTAACAACCCAGCAGCATGTGGATACTTTGTTTGTGTTAGATTTAATATTGGGTTTTGGTAGTGTTTGTTTCTTTAGTAATCTCTTATGGTTGGTTGTGGGGTTTAATTTGGGTCTTGGTAATTGTAGTAAGTTACATGTTTTTCCCTTTGTGTTTTGGGTGGGCTAGTCTTGGGGAATATATACCCCTCTCTCCAGTGTCTCTGGAGGTCGGGTTTGTTTATGTTAAAGGTACCTGGCATTATTGTTATGTTGACCTCAGTTTTGTTAAAGACCCACgtctaagtatttttgttgaaaCTTTAATGGCTATAGCTGGCAAAAATAAAGCCTATATTTTTCTGAACAACAACCATGTGTCCTTGCCTATGCTGCTTGGTCCCTGACACTGCcctttgttgttctttttggaATACTCAAATTTGCTGCATTTAAAACGTGTTCTATAATTTGCTTTGTgcatttttctgcatttcctACTAATGTAACCAGGTTAACTGACTCCTCACAACATGATCTACATGTCCCCATTCTGCTTTCTCAAAGCACCATCTGGTAATTGTAAACCATTCTAGAATACAAATGTTTGTTGTGACTACAGTGAGAACTGGGAAGTGCTCACTTATGGTAGATTCACTCTTTACATGCCATTCACATGCATTCACTAAAGTCTGATACCAAGCATGATGTATTACCCCTATTCACATGTATTCTTACCCTGTCCATTATTTAGGCAGACCAATAATCTTTCTTCCATCATTTCTTCAACTATGTTCCCATTATTATCTGTATGGTTGCTACCCCATAGGCTATAAGCATTACAATCTCCACACCCTATTTATTTCCTGTAGACTGTTCCTGCCATTTCATTTAATCtgttaatatttaaatttttgcATGAATTATAAAAATTGATCACCTTAATATGAGCCTCTTTCCTTGGACTACAGATCTCACCCATTATACACTCCATATCCTCTGGGAAAGGGAGCTCCCTATATGCCAACCCATCCTTGAGAAAGGTAGCACGCCCTCCACCATTTTGGTTGTTAGATCtatca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169078 True 1437 lncRNA 0.39 3 20691897 20697240

Neighbor

gene id symbol gene type direction distance location
LOC120569729 LOC103352860,LOC100709268 coding downstream 27013 20649268 ~ 20664884 (-)
u2af1 LOC103352857,LOC103391595 coding downstream 55292 20630090 ~ 20636605 (-)
cbsb NA coding downstream 80236 20589788 ~ 20611661 (-)
ankrd10b ankrd10,LOC102292027 coding downstream 176694 20499453 ~ 20515203 (-)
ube2al ube2al,ube2a,LOC105934920,LOC104955100,LOC103021436,LOC103029486,LOC108259060,LOC107552373 coding downstream 193026 20492166 ~ 20498871 (-)
LOC120569295 grpr,LOC103352898,LOC100697445,LOC101071331,LOC101471274,LOC102795360 coding upstream 18346 20715586 ~ 20719763 (-)
srpx srpx,LOC102777533 coding upstream 77838 20775078 ~ 20792247 (-)
rpgra NA coding upstream 98477 20795717 ~ 20809233 (-)
dcaf6 NA coding upstream 127534 20824774 ~ 20850992 (-)
rpl24 rpl24 coding upstream 163974 20861214 ~ 20865558 (-)
G125703 NA non-coding downstream 4984 20686696 ~ 20686913 (-)
G125701 NA non-coding downstream 7487 20683895 ~ 20684410 (-)
G125694 NA non-coding downstream 24492 20667046 ~ 20667405 (-)
G125658 NA non-coding downstream 106965 20584648 ~ 20584932 (-)
G125605 NA non-coding downstream 361182 20330508 ~ 20330715 (-)
G125720 NA non-coding upstream 13625 20710865 ~ 20713149 (-)
G125784 NA non-coding upstream 60467 20757707 ~ 20759225 (-)
G125800 NA non-coding upstream 162359 20859599 ~ 20859991 (-)
G125839 NA non-coding upstream 213330 20910570 ~ 20910806 (-)
G125845 NA non-coding upstream 255692 20952932 ~ 20953578 (-)
G125620 col4a2 other downstream 224712 20464109 ~ 20467185 (-)
G125619 col4a2 other downstream 230268 20459162 ~ 20461629 (-)
si:ch211-214p13.7 NA other downstream 768162 19921268 ~ 19923735 (-)
LOC120570223 NA other downstream 895677 19790052 ~ 19796220 (-)
si:ch211-214p13.3 NA other downstream 923311 19751701 ~ 19768586 (-)
LOC120570047 dynlt3 other upstream 37310 20734550 ~ 20738320 (-)
G125842 NA other upstream 256421 20953661 ~ 20960064 (-)
LOC120569741 LOC104951940,LOC103391685,LOC103352881 other upstream 281761 20979001 ~ 20986633 (-)
tmtops2b LOC100693281,LOC102294429,LOC102792754,LOC101463828,LOC102207603,LOC103352886 other upstream 413947 21111187 ~ 21149005 (-)
ecrg4a Augurin-B,LOC103352889 other upstream 495668 21192908 ~ 21198088 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000028_07209430_07220674 NA coding CI01000028 null 7208209 ~ 7220801 (-)