G125784


Basic Information

Item Value
gene id G125784
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 20757707 ~ 20759225 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU169178
TGCCTTTTTTATCCATCTTCAtccttCCTTTCTTCCTGGCACCATCCACAATGTTGAGTATTGCACTTCTGTTGGATTTCGGTGTGTCGGATCTCTCTGACTCAGAAGTGGCTGACTGGTTTTctgttgactttttttctggGATGATTGGACTACTCATGATTGTCTGTTTGATCACGTCACCACTTGGCACTCCCTGCTCAAAGCGCTTGGACCGCTCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169178 True 223 lncRNA 0.47 3 20757707 20759225

Neighbor

gene id symbol gene type direction distance location
LOC120569295 grpr,LOC103352898,LOC100697445,LOC101071331,LOC101471274,LOC102795360 coding downstream 37944 20715586 ~ 20719763 (-)
LOC120569729 LOC103352860,LOC100709268 coding downstream 92823 20649268 ~ 20664884 (-)
u2af1 LOC103352857,LOC103391595 coding downstream 121102 20630090 ~ 20636605 (-)
cbsb NA coding downstream 146046 20589788 ~ 20611661 (-)
ankrd10b ankrd10,LOC102292027 coding downstream 242504 20499453 ~ 20515203 (-)
srpx srpx,LOC102777533 coding upstream 15853 20775078 ~ 20792247 (-)
rpgra NA coding upstream 36492 20795717 ~ 20809233 (-)
dcaf6 NA coding upstream 65549 20824774 ~ 20850992 (-)
rpl24 rpl24 coding upstream 101989 20861214 ~ 20865558 (-)
LOC120570677 NA coding upstream 104560 20863785 ~ 20863953 (-)
G125720 NA non-coding downstream 44558 20710865 ~ 20713149 (-)
G125708 NA non-coding downstream 60467 20691897 ~ 20697240 (-)
G125703 NA non-coding downstream 70794 20686696 ~ 20686913 (-)
G125701 NA non-coding downstream 73297 20683895 ~ 20684410 (-)
G125694 NA non-coding downstream 90302 20667046 ~ 20667405 (-)
G125800 NA non-coding upstream 100374 20859599 ~ 20859991 (-)
G125839 NA non-coding upstream 151345 20910570 ~ 20910806 (-)
G125845 NA non-coding upstream 193707 20952932 ~ 20953578 (-)
G125848 NA non-coding upstream 215007 20974232 ~ 20976915 (-)
G125852 NA non-coding upstream 237267 20996492 ~ 20998787 (-)
LOC120570047 dynlt3 other downstream 19387 20734550 ~ 20738320 (-)
G125620 col4a2 other downstream 290522 20464109 ~ 20467185 (-)
G125619 col4a2 other downstream 296078 20459162 ~ 20461629 (-)
si:ch211-214p13.7 NA other downstream 833972 19921268 ~ 19923735 (-)
LOC120570223 NA other downstream 961487 19790052 ~ 19796220 (-)
G125842 NA other upstream 194436 20953661 ~ 20960064 (-)
LOC120569741 LOC104951940,LOC103391685,LOC103352881 other upstream 219776 20979001 ~ 20986633 (-)
tmtops2b LOC100693281,LOC102294429,LOC102792754,LOC101463828,LOC102207603,LOC103352886 other upstream 351962 21111187 ~ 21149005 (-)
ecrg4a Augurin-B,LOC103352889 other upstream 433683 21192908 ~ 21198088 (-)
c12h2orf49 NA other upstream 517697 21276922 ~ 21279859 (-)

Expression


Co-expression Network